Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J17
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 156 2e-38
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 82 6e-16
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 38 0.010
Z81079-4|CAB03081.1| 236|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 29 6.0
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 156 bits (379), Expect = 2e-38
Identities = 68/125 (54%), Positives = 94/125 (75%)
Frame = +1
Query: 181 STGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIAD 360
STGT+++A E++GGVV+G DSRT+ G++I +R T+K+T ITD + CRSGSAADTQAIAD
Sbjct: 21 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIAD 80
Query: 361 IVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRDSLMAGILVAGWDKKKGAQIYSIPIG 540
I YH++ + M P + ++ IFR+ YNYR+ L A +LVAGWD++ G Q+Y+IPIG
Sbjct: 81 IAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDEELGGQVYAIPIG 140
Query: 541 GMVQR 555
G V R
Sbjct: 141 GFVSR 145
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 81.8 bits (193), Expect = 6e-16
Identities = 43/121 (35%), Positives = 70/121 (57%)
Frame = +1
Query: 181 STGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIAD 360
STGT+I+A F GG+V+GADSR T G IA++ +K+ K+T+ IY C +G+AAD +
Sbjct: 44 STGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTK 103
Query: 361 IVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRDSLMAGILVAGWDKKKGAQIYSIPIG 540
+++ +L ++ G V TA ++ +NY+ + A +L+ G D G +Y
Sbjct: 104 MLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVD-PTGPHLYMCSAN 162
Query: 541 G 543
G
Sbjct: 163 G 163
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 217 GGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIADIVTYHLNFHKME 396
GG+++ DSR ++G YI+++ K+ I D++ +G AAD Q IV + +++
Sbjct: 81 GGIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELR 140
Query: 397 LGDPPLVETAAAIFRELCYNYR-DSLMAGILVAGWDKKKGAQIYSIPI-GGMVQRPAVSL 570
V A+ F Y YR L G +VAG+D KKG QI+ + G Q S+
Sbjct: 141 EKTSITVSAASKYFANTLYGYRGQGLSVGSMVAGYD-KKGPQIFKVDSEGDRCQLKVCSV 199
Query: 571 GA 576
G+
Sbjct: 200 GS 201
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 37.9 bits (84), Expect = 0.010
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Frame = +1
Query: 220 GVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIADIVTYHLNFHKMEL 399
G+V+ A+ + + +T+K+ +++D I C +G AD + + + + ++
Sbjct: 42 GIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSY 101
Query: 400 GDPPLVETAAAIFRELCYNYRDSLMAG--------ILVAGWDKKKGAQIY-SIPIGGMVQ 552
G+ VE + + LC + G +L GWDK G Q+Y S P G
Sbjct: 102 GEEMPVE---QLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTG 158
Query: 553 RPAVSLGA 576
A +G+
Sbjct: 159 WKATCIGS 166
>Z81079-4|CAB03081.1| 236|Caenorhabditis elegans Hypothetical
protein F39H11.5 protein.
Length = 236
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 175 PHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAI 354
P TGTS++A ++ GVV+ D + G + + K+ D + G AD +
Sbjct: 13 PTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAFGGDHADFHWL 72
Query: 355 ADIV 366
+++
Sbjct: 73 QNVI 76
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 31.9 bits (69), Expect = 0.65
Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 6/147 (4%)
Frame = +1
Query: 172 APHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQA 351
A +ST + +A + VI R +A+ VT + +I+ + CC G D +
Sbjct: 31 AINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS-VYQISQSVGCCAIGMIPDAKF 89
Query: 352 IADIVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRD-----SLMAGILVAGWDKKKGA 516
K + G E A +L Y SL +L +D +KG
Sbjct: 90 QIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGP 149
Query: 517 QIYSI-PIGGMVQRPAVSLGAPDPPTS 594
++Y + P G VS+G P +
Sbjct: 150 EVYRVDPAGYYRGMKGVSVGVKQLPAT 176
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 427 AAIFRELCYNYRDSLMAGILVAGW-DKKKGAQIYSIPIG 540
A+ FRE Y+Y L VAGW DK +I P G
Sbjct: 248 ASNFRESFYSYNYKLEKDSAVAGWIDKAGNCEIADFPTG 286
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Frame = +1
Query: 286 KLTKITDQIYCCRSGSAADTQAIADIVTYHLNFHKMELGDP----PLVETAAAIFRELCY 453
K+ +I+ I C SG D + + ++M G+ LV AA+ +E
Sbjct: 60 KVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQ 119
Query: 454 NYR-DSLMAGILVAGWDKKKGAQI--YSIPIGGMVQRPAVSLGAPD 582
+ A +L+AGWDK G + P G A +LG D
Sbjct: 120 SGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKND 165
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 454 NYRD-SLMAGILVAGWDKKKGAQIYSIPIGGMVQRPAVSLGAPDPPTSMATLTPXSS 621
+YR S AG + +G + Y+ P V+ +VS+GA DPPTS A SS
Sbjct: 54 SYRPTSYRAGSITSGGNSSNSTSSYT-PRN--VRAGSVSIGAYDPPTSRADSVSSSS 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,595,082
Number of Sequences: 27780
Number of extensions: 335261
Number of successful extensions: 822
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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