Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_J15
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0570 - 4231100-4232560                                           34   0.18 
11_04_0009 - 12132781-12133272                                         31   0.96 
07_01_0862 - 7172083-7172931                                           30   2.2  
03_05_0908 + 28686855-28687328                                         29   6.8  

>01_01_0570 - 4231100-4232560
          Length = 486

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 25/77 (32%), Positives = 27/77 (35%)
 Frame = -2

Query: 855 SPGGVGPWGALKGXXEXXVX*NGFXLGGXXXGXGXGAX*GXXGGXXXXRAVFXXPQXFRX 676
           S GGVG  G L+G         G   GG   G G GA  G  GG      V    +    
Sbjct: 132 SGGGVGAGGGLRGGGGVGAGGGGGFGGGAGGGGGIGAGGGFGGGAGAGGGVGGGGRFGGG 191

Query: 675 WFGPXTGXQGXGXGGXG 625
             G   G  G   GG G
Sbjct: 192 GMGGGGGFGGGAGGGVG 208


>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -1

Query: 220 RSSTWAREQRWSXSKPAPERRRRIGSLRNSXVSLCKFKGG 101
           R   W RE+R S  +  P +RRR+G  R      C    G
Sbjct: 108 RGEAWRRERRDSKIESRPSQRRRVGGRRGCGSGTCAESAG 147


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +3

Query: 726 PRXTPIXPPFXNPXXRXPXKNHFXTPPXRXSPLKLP-XAPXPRGXAK 863
           P+  P+ PP   P    P K +   PP    P K P   P P   AK
Sbjct: 178 PKKKPLPPPSPPPQPPLPEKENTPLPPLLLPPKKKPLPPPSPTAAAK 224


>03_05_0908 + 28686855-28687328
          Length = 157

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 147 PILRLRSGAGFEXDQRCSRAQVEDLQXIEKMGRXIRDGXVKAGPAIEVLGSAXA 308
           P++ + + AG   D R  R   +D+Q + + GR +    V A  A   L +A A
Sbjct: 74  PVMTVTTPAGAVGDDRRRRGGDDDVQLLPRRGRSVGVALVMARAARRALAAAAA 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,989,702
Number of Sequences: 37544
Number of extensions: 257970
Number of successful extensions: 2248
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)