Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J14
(908 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.098
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.39
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.69
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.4
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 8.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 8.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.098
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXPTXPTXPXKTXP 663
P PPP P P G PP P P P P P K P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 29.5 bits (63), Expect = 0.69
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +1
Query: 517 PPPPPPXPX--PXPFXGPGSXRXXPPXXNXPSPXPXXHXPTXPTXPXKTXPPL 669
PP P P P P G PP P P P P P P T PP+
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP--PVPPPSTAPPV 1219
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXG-PGSXRXXPPXXNXPSPXPXXHXPTXPTXPXKTXPPL 669
P PP P P P S PP + PS T P P PP+
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPV 1014
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXPTXPTXP 648
PPPPPP P P N P+P P + P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 520 PPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXPTXPTXPXKTXPPL 669
PPPPP P GS P + P P P P+ P PPL
Sbjct: 337 PPPPPPPRSN---AAGSIPLPPQGRSAPPPPPPRSAPSTGRQP----PPL 379
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXPTXPTXPXKTXPP 666
PPPPP P P P P P P P P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Frame = +1
Query: 520 PPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXP-TXPTXPXKTXPP 666
PPPPP P P PP P P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 523 PPPPXPXPXPFXGPGSXRXXPPXXNXPSP 609
PPPP P P GS P P P
Sbjct: 775 PPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +1
Query: 526 PPPXPXPXPFXGPGSXRXXPPXXNXPSPXP-XXHXPTXPTXPXKTXP 663
PP P P P S PP + P P P P P K+ P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/49 (28%), Positives = 17/49 (34%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXPTXPTXPXKTXP 663
PPP P P P P PP + P P+ P+ P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAA--PVKSPPSAPSLPSAVPP 196
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 517 PPPPPPXPXP 546
PPPPPP P P
Sbjct: 5 PPPPPPAPAP 14
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXPT-XPTXPXKTXPP 666
PP P P P P + P PSP P+ P P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/50 (26%), Positives = 18/50 (36%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXPTXPTXPXKTXPP 666
P PPPP P P + + P N + + P P P + P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -1
Query: 638 GXVGXWXXGXGEGXXXXG-GXXRXXPGPXKGXGXGXGGGGGG 516
G G + GEG G G PG +G G GGG GG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -1
Query: 665 GGXVFXGXVGXVGXWXXGXGEGXXXXGGXXRXXPGPXKGXGXGXGGGGGG 516
GG G G G G G G G PG G G GGG GG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHG-GFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXGPGSXRXXPPXXNXPSPXPXXHXPTXP 639
PPPPP P P P P P P P P+ P
Sbjct: 1707 PPPPPMSVPPPPSAPP---MPAGPPSAPPPPLPASSAPSVP 1744
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 517 PPPPPPXPXP 546
PPPPPP P P
Sbjct: 356 PPPPPPMPAP 365
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 517 PPPPPPXPXPXPFXGPGSXRXXPP 588
PP PP P P P P S PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,785,863
Number of Sequences: 5004
Number of extensions: 26791
Number of successful extensions: 180
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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