Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J13
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.049
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.049
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.15
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.26
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.60
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.60
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 30 2.4
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 30 2.4
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 30 2.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.4
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 29 4.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 7.4
U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protei... 28 7.4
U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 28 7.4
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 7.4
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 7.4
Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.8
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 28 9.8
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 28 9.8
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 28 9.8
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 28 9.8
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 28 9.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 9.8
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 37.1 bits (82), Expect = 0.016
Identities = 32/104 (30%), Positives = 33/104 (31%)
Frame = -3
Query: 656 GXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPG 477
G GG P GW G G G GR G GG G W GG G
Sbjct: 37 GGRSGGWGRP---GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGG--GGNWGGNGGGGNGG 91
Query: 476 GXRGXXGXXXXGXAFXGGXKXXARKXXXXRGPIPGAXXKRXGXG 345
G RG G G GG + RG G R G G
Sbjct: 92 GGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG---GGGGGRGGGG 132
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -2
Query: 585 GXGGKGGPXG*AXEXGXXXXXXXXXXXXGXGGGXAXGXPGXXWGXGGGXXFXGGXKXXG 409
G GG G G G G GGG G G G GGG GG G
Sbjct: 67 GRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.5 bits (78), Expect = 0.049
Identities = 25/82 (30%), Positives = 27/82 (32%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERX 498
G G G GGG G CG G G G G G GG +G
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGG--CGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 497 XGGXGPGGXRGXXGXXXXGXAF 432
GG G GG G G G +
Sbjct: 160 GGGCGGGGGGGCGGGSSGGGGY 181
Score = 32.3 bits (70), Expect = 0.45
Identities = 26/85 (30%), Positives = 26/85 (30%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERX 498
G G G GGG G CG G G G G G GG G
Sbjct: 109 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG-----GSSGGCGGGGGGGC 163
Query: 497 XGGXGPGGXRGXXGXXXXGXAFXGG 423
GG G G G G A GG
Sbjct: 164 GGGGGGGCGGGSSGGGGYAVAPSGG 188
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAG----EX 510
G G G GGG G CG G G G G G GG +G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGG-GSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAV 183
Query: 509 WERXXGGXGPGGXRGXXG 456
GG G GG G G
Sbjct: 184 APSGGGGCGGGGSSGGGG 201
Score = 27.9 bits (59), Expect = 9.8
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Frame = -3
Query: 656 GXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGP- 480
G GGG G CG G G G G G GG G GG G
Sbjct: 82 GCGGGGGGCGGGGGGCGGGGG--CGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 479 -GGXRGXXGXXXXGXAFXGG 423
GG G G G GG
Sbjct: 140 GGGSSGGCGGGSSGGCGGGG 159
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 579 GGKGGPXG*AXEXGXXXXXXXXXXXXGXGGGXAXGXPGXXWGXGGGXXFXGGXKXXG 409
GG GG G G G GGG G G G GGG GG G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 141
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.5 bits (78), Expect = 0.049
Identities = 25/82 (30%), Positives = 27/82 (32%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERX 498
G G G GGG G CG G G G G G GG +G
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGG--CGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 497 XGGXGPGGXRGXXGXXXXGXAF 432
GG G GG G G G +
Sbjct: 160 GGGCGGGGGGGCGGGSSGGGGY 181
Score = 32.3 bits (70), Expect = 0.45
Identities = 26/85 (30%), Positives = 26/85 (30%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERX 498
G G G GGG G CG G G G G G GG G
Sbjct: 109 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG-----GSSGGCGGGGGGGC 163
Query: 497 XGGXGPGGXRGXXGXXXXGXAFXGG 423
GG G G G G A GG
Sbjct: 164 GGGGGGGCGGGSSGGGGYAVAPSGG 188
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAG----EX 510
G G G GGG G CG G G G G G GG +G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGG-GSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAV 183
Query: 509 WERXXGGXGPGGXRGXXG 456
GG G GG G G
Sbjct: 184 APSGGGGCGGGGSSGGGG 201
Score = 27.9 bits (59), Expect = 9.8
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Frame = -3
Query: 656 GXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGP- 480
G GGG G CG G G G G G GG G GG G
Sbjct: 82 GCGGGGGGCGGGGGGCGGGGG--CGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 479 -GGXRGXXGXXXXGXAFXGG 423
GG G G G GG
Sbjct: 140 GGGSSGGCGGGSSGGCGGGG 159
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 579 GGKGGPXG*AXEXGXXXXXXXXXXXXGXGGGXAXGXPGXXWGXGGGXXFXGGXKXXG 409
GG GG G G G GGG G G G GGG GG G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 141
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/87 (31%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWC--GXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWE 504
G G G GGG P C G G G G G G GG G
Sbjct: 96 GGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGG 155
Query: 503 RXXGGXGPGGXRGXXGXXXXGXAFXGG 423
GG G GG G G G GG
Sbjct: 156 CGGGGGGCGGGGGGCGGGGGGGCGGGG 182
Score = 33.1 bits (72), Expect = 0.26
Identities = 24/78 (30%), Positives = 24/78 (30%)
Frame = -3
Query: 656 GXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPG 477
G GGG G CG G G G P GG G GG G G
Sbjct: 77 GGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGG 136
Query: 476 GXRGXXGXXXXGXAFXGG 423
G G G G GG
Sbjct: 137 GGGGCGGGGGGGCGGGGG 154
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -2
Query: 585 GXGGKGGPXG*AXEXGXXXXXXXXXXXXGXGGGXAXGXPGXXWGXGGGXXFXGGXKXXG 409
G GG GG G G GGG G G G GGG GG G
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERX 498
G G G GGG P CG G G G G GG G
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPPACGGG-----CGGGGGGCGGGGGGCGGGGGCGGGGGGCG 93
Query: 497 XGGXGPGGXRGXXG 456
GG G GG G G
Sbjct: 94 GGGGGCGGGGGCGG 107
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -3
Query: 647 GGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPGGXR 468
GGG G CG G G G P GG G GG G GG
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
Query: 467 GXXG 456
G G
Sbjct: 84 GCGG 87
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 579 GGKGGPXG*AXEXGXXXXXXXXXXXXGXGGGXAXGXPGXXWGXGGGXXFXGGXKXXG 409
GG GG G G G GGG G G G GGG GG G
Sbjct: 124 GGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 180
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 579 GGKGGPXG*AXEXGXXXXXXXXXXXXGXGGGXAXGXPGXXWGXGGGXXFXGGXKXXG 409
GG GG G G G GGG G G G GGG GG G
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCG 187
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.26
Identities = 27/74 (36%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXP-XGRPXKXGXRGGVAGEXW-- 507
G GA G GGG P G G G G RG P G G RGG G
Sbjct: 517 GYGAYGGGY-GGGYGGPGAYGDFGAYGGGGFRGGMRGSPRGGMGGGGGFRGGPPGRGGMA 575
Query: 506 ERXXGGXGPGGXRG 465
R G PG RG
Sbjct: 576 NRRGRGKRPGDGRG 589
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = -3
Query: 671 GAXXAGXXG--GGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERX 498
GA G G G AP +G G G R + P G P G G G
Sbjct: 138 GAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGP 197
Query: 497 XGGXGPGGXRGXXG 456
G GP G G G
Sbjct: 198 AGPAGPPGPDGNPG 211
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = -3
Query: 671 GAXXAGXXG--GGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERX 498
GA G G G AP +G G G R + P G P G G G
Sbjct: 138 GAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGP 197
Query: 497 XGGXGPGGXRGXXG 456
G GP G G G
Sbjct: 198 AGPAGPPGPDGNPG 211
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/64 (32%), Positives = 25/64 (39%)
Frame = -3
Query: 647 GGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPGGXR 468
GG P +G G RG G G P G+P + G G E + G GP G
Sbjct: 148 GGEAGPPGPDGEPGVRGPNG-PPGPNGHP-GQPGRPGPAGPAGPEGKDGPVGPHGPAGPA 205
Query: 467 GXXG 456
G G
Sbjct: 206 GPRG 209
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 517 PATPPLXPXFXGLPXGXPLXPXXKXRXPLXPHHPSXSGAXXPPPXXPAXXAPXP 678
P PP P +P P P R P P SG PPP P P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPP----PPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 517 PATPPLXPXFXGLPXGXPLXPXXKXRXPLXPHHPSXSGAXXPPPXXPAXXAPXP 678
P PP P +P P P R P P SG PPP P P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPP----PPPSSGMWPPPPPPPPGRTPGP 320
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = -3
Query: 671 GAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXG 492
G A GG P G G RG G G P G P K G G G G
Sbjct: 191 GNNGAPGAAGGPGQPGRPGKDGQRGK-----GSAGAP-GAPGKAGPAGPAGGPGNNGSAG 244
Query: 491 GXGPGGXRGXXG 456
GP G G G
Sbjct: 245 TPGPAGPAGNPG 256
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = -3
Query: 659 AGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPX--GRPXKXGXRGGVAGEXWERXXGGX 486
+G G PE G G L G G P G P + G G + W G
Sbjct: 221 SGPIGDKGRTPEAHVIPGPPGDSGLP-GPWGPPGSAGMPGEDGYAGTPGEKGWPGPPGAP 279
Query: 485 GPGGXRGXXG 456
GPGG G G
Sbjct: 280 GPGGMPGPNG 289
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = -3
Query: 659 AGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPX--GRPXKXGXRGGVAGEXWERXXGGX 486
+G G PE G G L G G P G P + G G + W G
Sbjct: 221 SGPIGDKGRTPEAHVIPGPPGDSGLP-GPWGPPGSAGMPGEDGYAGTPGEKGWPGPPGAP 279
Query: 485 GPGGXRGXXG 456
GPGG G G
Sbjct: 280 GPGGMPGPNG 289
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Frame = -3
Query: 677 GXGAXXAGXXGG-GXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWER 501
G G G GG G G G G R G G G G GG G+
Sbjct: 34 GWGGNRWGGGGGPGGWGNNGGGGWGRGGGRG--GGDWGGNNGGGGNWGGNGGGRGDWGGN 91
Query: 500 XXGGXGPGGXRGXXGXXXXGXAFXGG 423
GG G GG G G GG
Sbjct: 92 GGGGRGGGGRGDWGGNNNGGGGNWGG 117
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Frame = -3
Query: 644 GGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRG-----GVAGEXWER-XXGGXG 483
G AP +G G G + P GRP G RG G G+ GG G
Sbjct: 211 GEMGAPGPQGKQGPDGRQGEKGADGRKPIGRPGPKGQRGPQGEQGPVGDNGRNGPVGGAG 270
Query: 482 PGGXRGXXG 456
P G +G G
Sbjct: 271 PAGPQGGSG 279
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.5 bits (63), Expect = 3.2
Identities = 29/113 (25%), Positives = 30/113 (26%)
Frame = -3
Query: 794 GGGGGEXXXQIXWXKGXXEXRXXXXXXXXXXXXXXFXXXGXGAXXAGXXGGGXXAPEXEG 615
GGG G W G G G G G G
Sbjct: 48 GGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGGFGDNGGLRGGNGGGRGGNGG 107
Query: 614 WCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPGGXRGXXG 456
+ G R G RG G G RGG G GG GG RG G
Sbjct: 108 FDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGG--GRGGNGGGNNGGGRGGNG 158
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 585 GXGGKGGPXG*AXEXGXXXXXXXXXXXXGXGGGXAXGXPGXXWGXGGGXXFXGGXKXXG 409
G G GG G G GGG G G +G GGG + GG G
Sbjct: 2 GDRGYGGSRSYGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGG 60
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 563 PXGRPXKXGXRGGVAGEXWERXXGGXGPGGXRGXXG 456
P G P G +GGV E G GP G +G G
Sbjct: 307 PPGPPGVRGIQGGVGSRGAEGNPGPKGPPGLQGDIG 342
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 405 PGPXFXTPXKSXPXXPXPXXSPGPPXPXPP 494
PGP + S P P PGPP PP
Sbjct: 229 PGPVDPSDEPSPSDPPGPPGPPGPPTRRPP 258
>U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protein
172, isoform b protein.
Length = 108
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -3
Query: 644 GGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPGGXRG 465
G P G G RG R + G G P G P + G G + E G GP G +G
Sbjct: 34 GPAGPPGLPGTPGKRGARGMD-GLPG-PQGAPGQQGDSGLSGPDGKEGARGERGPQGPQG 91
Query: 464 XXG 456
G
Sbjct: 92 LKG 94
>U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein
172, isoform a protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -3
Query: 644 GGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPGGXRG 465
G P G G RG R + G G P G P + G G + E G GP G +G
Sbjct: 267 GPAGPPGLPGTPGKRGARGMD-GLPG-PQGAPGQQGDSGLSGPDGKEGARGERGPQGPQG 324
Query: 464 XXG 456
G
Sbjct: 325 LKG 327
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 405 PGPXFXTPXKSXPXXPXPXXSPGPPXPXPP 494
PG F P + P P PGPP P P
Sbjct: 125 PGHHFQGPPQHFPPGPPRPHFPGPPGPHRP 154
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = -3
Query: 671 GAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXG 492
G+ G GGG GW G G R G G G G GG G + G
Sbjct: 214 GSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGG---GRGYGGGGGGGGYGYGGG 270
Query: 491 GXG 483
G G
Sbjct: 271 GGG 273
>Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical
protein Y41E3.18 protein.
Length = 510
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +3
Query: 66 PTRRITLXQAYLELNKFCQSSDYERALKAAGENTADSTK*AESIS 200
PTR+ ++ ++ L L+K + S+ + LK GEN +++ + A +S
Sbjct: 31 PTRQKSINKSLLSLDKTQEFSETSQKLKIDGENRSENHRNAVILS 75
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = -3
Query: 617 GWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPGGXRGXXG 456
G G G P G P G +G + GG GP G +G G
Sbjct: 120 GLTGGNGPCITCPAGAPGPAGAPGAPGPQGPSGAPGQDAVGGGPGPAGPQGPAG 173
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = -3
Query: 677 GXGAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRG--GVAGEXWE 504
G G AG GGG G G G G G P GRP K G G G G
Sbjct: 89 GGGGYGAGGGGGGGGGEAAGGGGGCTG--CCNPGPPG-PGGRPGKPGTPGKPGAPGNPGA 145
Query: 503 RXXGGXGP 480
G P
Sbjct: 146 SGKGAAAP 153
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 160 KILQIAPNEQKAFHCKVVCFLQLHNXQGGSSHINPCPQFRG*QXNLXFXKAYLN 321
K+++ P E AF CK+V +QL I P + ++ F KAY++
Sbjct: 34 KLIRKYPKETFAFKCKLVAQIQLSQYADALELIRKTPAHQ--MGHVGFEKAYIH 85
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 578 GXRGXPXGRPXKXGXRGGVAGEXWERXXGGXGPGGXRGXXG 456
G G P GRP G RG E G GP G RG G
Sbjct: 190 GRPGNP-GRPGPAGPRGEPGTEYKPGQPGRPGPPGPRGEAG 229
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/72 (25%), Positives = 22/72 (30%)
Frame = -3
Query: 671 GAXXAGXXGGGXXAPEXEGWCGXRGXRXLXXGXRGXPXGRPXKXGXRGGVAGEXWERXXG 492
GA A G P +G+ G G G P G G + + G
Sbjct: 183 GAPGAPGDNGQPGTPGQDGFPGQPGADGQRGSGAPGAPGAPGNAGPAGPAGQDGFPGQDG 242
Query: 491 GXGPGGXRGXXG 456
GP G G G
Sbjct: 243 APGPAGPAGQDG 254
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 27.9 bits (59), Expect = 9.8
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = -3
Query: 659 AGXXGGGXXA--PEXEGWCGXRGXRXLXXGXRGXPX--GRPXKXGXRGGVAGEXWERXXG 492
AG GG P G G +G + G G P GRP G RG E G
Sbjct: 161 AGPAGGNGRRGPPGPVGGPGEQGPQ----GDAGRPGAAGRPGPAGPRGEPGTEYKPGQPG 216
Query: 491 GXGPGGXRGXXG 456
GP G RG G
Sbjct: 217 RPGPQGPRGETG 228
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 27.9 bits (59), Expect = 9.8
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = -3
Query: 659 AGXXGGGXXA--PEXEGWCGXRGXRXLXXGXRGXPX--GRPXKXGXRGGVAGEXWERXXG 492
AG GG P G G +G + G G P GRP G RG E G
Sbjct: 155 AGPAGGNGRRGPPGPVGGPGEQGPQ----GDAGRPGAAGRPGPAGPRGEPGTEYKPGQPG 210
Query: 491 GXGPGGXRGXXG 456
GP G RG G
Sbjct: 211 RPGPQGPRGETG 222
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = -2
Query: 588 FGXGGKGGPX-G*AXEXGXXXXXXXXXXXXGXGGGXAXGXPGXXWGXGGGXXFXGGXKXX 412
+G GG GG G + G G GGG G G G GGG GG
Sbjct: 165 YGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGG-GMGGGGYGGGGDGGY 223
Query: 411 GP 406
GP
Sbjct: 224 GP 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,289,045
Number of Sequences: 27780
Number of extensions: 246053
Number of successful extensions: 1515
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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