Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J12
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated... 35 0.33
AL137254-1|CAB70656.1| 196|Homo sapiens hypothetical protein pr... 35 0.33
AB029032-1|BAA83061.2| 3086|Homo sapiens KIAA1109 protein protein. 35 0.33
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 5.4
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 5.4
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 5.4
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 5.4
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 5.4
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 5.4
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 5.4
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 5.4
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 5.4
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 5.4
>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
protein protein.
Length = 5005
Score = 35.1 bits (77), Expect = 0.33
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 311 IFNDDRGKLT--GQAYGTRVLGPGGDSTNYGGRLDWANKNAPATIDLNRPIGGRSGMTAS 484
+F+ +RG+L G Y L PGG++T G + + P + L P+ GRS ++S
Sbjct: 4076 VFSSNRGELETLGTTYPAETLSPGGNATQSGTKTSASKTGIPGSSGLGSPL-GRSRHSSS 4134
Query: 485 GS 490
S
Sbjct: 4135 QS 4136
>AL137254-1|CAB70656.1| 196|Homo sapiens hypothetical protein
protein.
Length = 196
Score = 35.1 bits (77), Expect = 0.33
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 311 IFNDDRGKLT--GQAYGTRVLGPGGDSTNYGGRLDWANKNAPATIDLNRPIGGRSGMTAS 484
+F+ +RG+L G Y L PGG++T G + + P + L P+ GRS ++S
Sbjct: 21 VFSSNRGELETLGTTYPAETLSPGGNATQSGTKTSASKTGIPGSSGLGSPL-GRSRHSSS 79
Query: 485 GS 490
S
Sbjct: 80 QS 81
>AB029032-1|BAA83061.2| 3086|Homo sapiens KIAA1109 protein protein.
Length = 3086
Score = 35.1 bits (77), Expect = 0.33
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 311 IFNDDRGKLT--GQAYGTRVLGPGGDSTNYGGRLDWANKNAPATIDLNRPIGGRSGMTAS 484
+F+ +RG+L G Y L PGG++T G + + P + L P+ GRS ++S
Sbjct: 2157 VFSSNRGELETLGTTYPAETLSPGGNATQSGTKTSASKTGIPGSSGLGSPL-GRSRHSSS 2215
Query: 485 GS 490
S
Sbjct: 2216 QS 2217
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 347 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 237 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 229 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 229 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 229 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 265 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 347 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 229 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 265 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 192 LKATSLVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 347 LPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,248,037
Number of Sequences: 237096
Number of extensions: 2329715
Number of successful extensions: 8388
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8310
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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