BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J09
(931 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 35 0.11
02_05_0686 - 30900748-30902167,30903442-30904742 35 0.11
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.43
12_01_0910 + 8858443-8859414 32 0.75
04_03_0904 + 20717005-20718087 32 0.75
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 0.99
06_03_0905 + 25843547-25844314 31 1.3
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 31 1.7
07_01_0516 - 3850252-3852870 31 1.7
06_01_0486 - 3455030-3455770 31 1.7
06_03_1146 - 28004896-28005554,28005664-28005844 30 2.3
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 30 2.3
12_02_0299 - 17051570-17052474,17053542-17053755 30 3.0
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867... 29 5.3
08_01_0059 - 394001-394708 29 5.3
03_01_0502 - 3779551-3779562,3779863-3780012,3780129-3780172,378... 29 5.3
02_05_0149 + 26290236-26290880 29 5.3
02_04_0400 - 22608519-22608844,22609044-22609122 29 5.3
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 29 5.3
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 29 5.3
12_02_1174 - 26696869-26698191 28 9.2
12_02_0939 + 24581356-24581628 28 9.2
11_01_0359 - 2731522-2732346 28 9.2
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 9.2
08_02_1611 - 28224239-28224511 28 9.2
08_02_0943 + 22849939-22850211 28 9.2
07_03_1107 - 24024387-24024497,24025799-24026410 28 9.2
05_07_0086 + 27596517-27596777 28 9.2
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 9.2
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 28 9.2
04_01_0495 - 6515982-6516254 28 9.2
01_06_0146 + 26969011-26969995,26970878-26970930 28 9.2
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +2
Query: 458 PHPPKXFXXXXSPPXSXKXXXXLXXPXXTXGXHXXXTPPPPHPHPXXXGGAXXXPLXGGX 637
P PP PP + P G PP P P P GG P GG
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAP-PLPEGIGGVPPPPPVGGL 1157
Query: 638 XGPP 649
GPP
Sbjct: 1158 GGPP 1161
Score = 29.5 bits (63), Expect = 4.0
Identities = 28/121 (23%), Positives = 33/121 (27%), Gaps = 5/121 (4%)
Frame = +3
Query: 465 PXXNLXXXXPPXXLXNXXXXSXPPXXLXGXIXXXXXXXXXXXXXXXXGPXXFPFXGGXXG 644
P ++ PP PP G + G P GG G
Sbjct: 1100 PPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGG 1159
Query: 645 PPXXNXNXX-AXWTPPPXQKGGXKTXXXFXKX----GGXXPPPXSXPPKXPXTTPXFXPX 809
PP TPPP GG + GG PP + P P P P
Sbjct: 1160 PPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
Query: 810 P 812
P
Sbjct: 1220 P 1220
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.7 bits (76), Expect = 0.11
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = +2
Query: 452 PXPHPPKXFXXXXSPPXSXKXXXXLXXPXXTXGXHXXXTPPPPHPHPXXXGGAXXXPLXG 631
P P PP PP P +PPPP P GG P G
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP-SPPPPPPPGGKKGGPPPPPPKG 384
Query: 632 GXXGPPXXXQXPXGXLD 682
G PP P G D
Sbjct: 385 GASRPPAAPGVPTGSAD 401
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 684 PPPXQKGGXKTXXXFXKXGGXXPPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
PPP K PPP PP P P P P P P P P
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGP---PPPPPPKGPSPPPP 367
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +3
Query: 684 PPPXQKGGXKTXXXFXKXGGXXPP--PXSXPPKXPXTTPXFXPXPXPLXFPXXPAPR 848
PPP +G PP P + PP P +P P P P P P P+
Sbjct: 1139 PPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQ 1195
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
PPP PP P P P P+ P P P
Sbjct: 1180 PPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPP 1211
>12_01_0910 + 8858443-8859414
Length = 323
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXPXPXPLXFP 830
PPP S PP P P + P P P P
Sbjct: 4 PPPPSLPPASPLPLPPWRPDPSPAVLP 30
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.9 bits (69), Expect = 0.75
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 753 PPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
PP PPK T P + P P P P P P
Sbjct: 70 PPAYTPPKPTPTPPTYTPTPKPTPPPYTPKP 100
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPX-FXPXPXPLXFPXXPAP 845
PPP P P TP + P P P P P P
Sbjct: 298 PPPTYKPQPKPTPTPTPYKPQPKPTPSPYTPKP 330
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 753 PPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
PP P P P + P P P P P P
Sbjct: 143 PPTYKPQPKPTPPPTYKPQPKPTPTPYTPTP 173
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 0.99
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAPR 848
PPP PP P F P P P P P P+
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQ 577
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +3
Query: 645 PPXXNXNXXAXWTPPPXQKGGXKTXXXFXKXGGXXPPPXSXPPKXPXTTPXFXPXPXP 818
PP + N A PPP PPP PP P P P P
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 684 PPPXQKGGXKTXXXFXKXGGXXPPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAPR 848
PPP T G PPP PP P P P P PA R
Sbjct: 670 PPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPP-PPPPANR 723
>06_03_0905 + 25843547-25844314
Length = 255
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXP--XPXPLXFPXXP 839
PPP PPK P T P P P P+ +P P
Sbjct: 76 PPPLVAPPKVPVTHPPKGPVTRPPPVTYPTPP 107
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAPRXXXXGA 866
PPP PP P P P P + P P P GA
Sbjct: 425 PPPPPLPPPPPPPPPPPPPLPPNMPPPLPPPPEPELNGA 463
>07_01_0516 - 3850252-3852870
Length = 872
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +3
Query: 750 PPPXSXPPKXPXTT---PXFXPXPXPLXFPXXPAPR 848
PPP PP+ P T+ P P P P P P PR
Sbjct: 10 PPPRLLPPQPPPTSRPLPPPPPPPPPAHGPSPPPPR 45
>06_01_0486 - 3455030-3455770
Length = 246
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 753 PPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
PP + P P TP + P P P P P P
Sbjct: 77 PPYTPPTPRPPPTPPYVPSPPPYVPPYIPPP 107
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 738 GGXXPPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
GG PP S P P P P P P P PAP
Sbjct: 136 GGRHAPPPSPPAVPPPVAP--VPMPSPASSPPSPAP 169
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 844 GAGXXGKXRGXGXGXKXGVVXGXFGGXEXGGG 749
G G G+ RG G G G G GG GGG
Sbjct: 44 GGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGG 75
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
PPP PP P + P P PL FP P+P
Sbjct: 321 PPPPPPPPPPPPSFPWPFPPLAPL-FPPYPSP 351
>11_04_0307 +
16185405-16185713,16185847-16185942,16186626-16186730,
16186938-16187090,16188395-16188478,16188566-16188694,
16188986-16189165,16189555-16189677,16189678-16189794,
16189889-16190053
Length = 486
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +3
Query: 678 WTPPPXQKGGXKTXXXFXKXGGXXPPPXSXPPKXPXTTP 794
W+ PP G PP PPK P T P
Sbjct: 18 WSAPPPSSSSPSPPVPPDPYGADLSPPPPPPPKPPPTVP 56
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAPR 848
PPP + PP P P P P+ P P PR
Sbjct: 11 PPPPATPPPPPRRAP--PPPSPPIRPPPPPTPR 41
>03_01_0502 -
3779551-3779562,3779863-3780012,3780129-3780172,
3780256-3780319,3780422-3780655,3780765-3780908,
3781027-3781221,3781447-3781522,3781689-3781788,
3781955-3781988,3782076-3782160,3782226-3782290,
3782380-3782478,3782810-3782875,3785485-3785721
Length = 534
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 847 RGAGXXGKXRGXGXGXKXGVVXGXFGGXEXGGG 749
RG+G G G G G + V G GG GGG
Sbjct: 3 RGSGAGGGGGGGGGGLELSVGVGGGGGARGGGG 35
>02_05_0149 + 26290236-26290880
Length = 214
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 844 GAGXXGKXRGXGXGXKXGVVXGXFGGXEXGGG 749
G G G R G G G G FGG GGG
Sbjct: 107 GGGGGGSGRAYGFGGGYGGHPGGFGGGGGGGG 138
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -1
Query: 844 GAGXXGKXRGXGXGXKXGVVXGXFGGXEXGGGXXPPXLXXXXXVFXPPFWXGG 686
G G G G G G + G G GG GGG + PP W GG
Sbjct: 49 GGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPP-WNGG 100
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +3
Query: 684 PPPXQKGGXKTXXXFXKXGGXXPPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
PPP +K + + PPP P P P P P P P P
Sbjct: 113 PPPRKKPQFQPPPQPPRAWDPSPPPPPPAPAAPVLVPPPAPAPRPAPAPAPRVP 166
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXPXPXPLXFPXXPA 842
PPP PP P T P P P P PA
Sbjct: 984 PPPPPSPPPLPITQPPSVPPPPNSPPPLQPA 1014
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 753 PPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
PP PP P P P P P P P P
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPPPPRP 167
>12_02_0939 + 24581356-24581628
Length = 90
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 829 GKXRGXGX-GXKXGVVXGXFGGXEXGGG 749
G+ RG G G + G G FGG E GGG
Sbjct: 53 GRGRGSGEEGVEGGGEGGGFGGGEDGGG 80
>11_01_0359 - 2731522-2732346
Length = 274
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Frame = +3
Query: 645 PPXXNXNXXAXWTPPPXQKGGXKTXXXFXKXGGXXPPPXSXPPKXPXTT---PXFXPXPX 815
PP N A PPP G P S PP P + P P
Sbjct: 11 PPSSNAAYFASAAPPPAATNGTAAFAVAYPYPAPPPHSHSHPPPPPPHAYHHHHYPPPPP 70
Query: 816 PLXFPXXPAP 845
P P P P
Sbjct: 71 PHHHPYPPHP 80
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 750 PPPXSXPPKXPXTTPXFXPXPXPL 821
PPP PP P P P P PL
Sbjct: 73 PPPPQTPPSPPPPPPPPPPPPPPL 96
>08_02_1611 - 28224239-28224511
Length = 90
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 829 GKXRGXGX-GXKXGVVXGXFGGXEXGGG 749
G+ RG G G + G G FGG E GGG
Sbjct: 53 GRGRGGGEEGVEGGGEGGGFGGGEDGGG 80
>08_02_0943 + 22849939-22850211
Length = 90
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 829 GKXRGXGX-GXKXGVVXGXFGGXEXGGG 749
G+ RG G G + G G FGG E GGG
Sbjct: 53 GRGRGGGEEGVEGGGEGGGFGGGEDGGG 80
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +3
Query: 681 TPPPXQKGGXKTXXXFXKXGGXXPPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
TPP K KT PP S PP TTP P P P PAP
Sbjct: 35 TPPASSK---KTPAPAAAPTTTTPPAASTPPAAAPTTP---ATPAPAEAPTTPAP 83
>05_07_0086 + 27596517-27596777
Length = 86
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 829 GKXRGXGX-GXKXGVVXGXFGGXEXGGG 749
G+ RG G G + G G FGG E GGG
Sbjct: 49 GRGRGDGEEGVEGGGEGGGFGGGEDGGG 76
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 847 RGAGXXGKXRGXGXGXKXGVVXGXFGGXEXGGG 749
RG G G+ RG G G G G GG GG
Sbjct: 5 RGGGGRGRGRGRGGGRGGGGGDGRGGGYGGAGG 37
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +3
Query: 753 PPXSXPP-KXPXTTPXFXPXPXPLXFPXXPAP 845
PP + PP P + P P P FP P P
Sbjct: 152 PPDNVPPASGPASRAPLVPAPPPAPFPPVPTP 183
>04_01_0495 - 6515982-6516254
Length = 90
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 829 GKXRGXGX-GXKXGVVXGXFGGXEXGGG 749
G+ RG G G + G G FGG E GGG
Sbjct: 53 GRGRGGGEEGVEGGGEGGGFGGGEDGGG 80
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/69 (27%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Frame = +3
Query: 645 PPXXNXNXXAXWTPPPXQKGGXKTXXXFXKXGGXXPPPXSXPPKXP--XTTPXFXPXPXP 818
PP + A TP P G PP P P TP P P
Sbjct: 46 PPPLPASAAAPTTPSPNHSGDPSRPIPSQAPAPPPPPTADPSPPLPHDNRTPQPRAAPPP 105
Query: 819 LXFPXXPAP 845
P PAP
Sbjct: 106 APAPDQPAP 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,279,662
Number of Sequences: 37544
Number of extensions: 323437
Number of successful extensions: 2260
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2017
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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