Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_J09
         (931 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.20 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.5  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   10.0 

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 572 PPPHPHPXXXGGAXXXPLXGGXXGPPXXXQXP 667
           PPP P P    G    PL GG  G P   + P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 756 PXSXPPKXPXTTPXFXPXPXPL 821
           P + PP  P   P   P P PL
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPL 598


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -1

Query: 844 GAGXXGKXRGXGXGXKXGVVXGXFGGXEXGGG 749
           G G  G  RG   G   G   G   G   GGG
Sbjct: 841 GGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 10.0
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +3

Query: 750 PPPXSXPPKXPXTTPXFXPXPXPLXFPXXPAP 845
           PPP    P  P   P     P  L  P  P P
Sbjct: 79  PPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLP 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,370
Number of Sequences: 2352
Number of extensions: 5551
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)