Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J02
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0471 + 34169562-34169892,34170121-34170347 31 0.94
01_03_0005 + 11568545-11569119,11569179-11569191 31 0.94
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 31 1.2
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 31 1.6
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.6
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 31 1.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.2
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 2.2
04_03_0807 - 19860041-19860132,19860248-19860347,19861101-198611... 30 2.9
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 6.6
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 6.6
01_06_1377 + 36764461-36765339 29 6.6
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 28 8.8
06_01_0576 - 4073261-4073821,4073891-4074145 28 8.8
05_03_0627 - 16342211-16342264,16342332-16342412,16342751-163428... 28 8.8
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 28 8.8
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 28 8.8
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 156 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 305
Y P P PP Y P+ GY P GAY +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.5 bits (68), Expect = 0.94
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -3
Query: 895 PKXXGGAXXXXGXGGXGXXXPPXXQNXXXPXGGGGXXXXXGRGKXPXPXPXPPXP 731
P G GG G PP GGGG G G P P PP P
Sbjct: 94 PPPYSGGGGGSSTGGGGIYYPPPTGGG---GGGGGGWQQGGGGGGAYPTPPPPNP 145
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = -3
Query: 862 GXGGXGXXXPPXXQNXXXPXGGGGXXXXXGRGKXPXPXPXPPXPGXKXXWXXXGGXG 692
G GG G + P GGG G G P P G W GG G
Sbjct: 78 GGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGGGGG 134
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 738 GGXGXGXGFFPRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXP 863
GG G G GF P PP P SP PP P
Sbjct: 21 GGGGGGGGFSPTAAKPPPPPSPRANGTAAAAKPSASPPPPPP 62
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 888 GXGGQXXFXGXGEXGXGXPXXXKTXXXPRGGGGGXAXXAEEKXXXHXXPP 739
G GG + G GE G G + RGGGG H PP
Sbjct: 164 GGGGGGGYHGDGEAGYGRGRGGRDYDGGRGGGGRRGGRGGGGSSYHQQPP 213
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 782 AXPPPPPRGXXXVLXXWGXPXPXSPXPXXXXCPPXP 889
A PPPPP+G G P P P PP P
Sbjct: 335 APPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +3
Query: 156 YEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQGRPYFKPTPFPGARG 314
Y P + P V PP Y P +G P N + Y + P GRP P P GA G
Sbjct: 394 YAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAGG 448
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 788 PPPPPRGXXXVLXXWGXPXPXSPXPXXXXCPPXP 889
PPPPP G P P SP P PP P
Sbjct: 94 PPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPP 127
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 144 QGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 299
QG Y+P R PP+ P Y P G Y +PQG+PY P P+
Sbjct: 246 QGETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291
>04_03_0807 -
19860041-19860132,19860248-19860347,19861101-19861170,
19861344-19861407,19862531-19862704,19862805-19862946,
19863413-19863544,19863616-19863705,19864093-19864152,
19864227-19864343,19864441-19864611,19866909-19866984,
19867156-19867223
Length = 451
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 94 EILHDFPSSLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVH 249
+I+HD SL LW ++T T +LT + LIL K + T + +H
Sbjct: 159 KIMHDEGLSLVPLWDDQQQTVTGMLTASDFVLILRKLQRNIRTLGHEELEMH 210
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 768 PRPXXXXXPPPPXGKXXFXLXGGXXSPXPP 857
PRP PPPP GK GG P PP
Sbjct: 923 PRPPGAPPPPPPPGK-----PGGPPPPPPP 947
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +3
Query: 693 PXPPXXFXXFFXPGXGGXGXGXGFFPRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXPXXX 872
P PP P G G F P PPPP S PP P
Sbjct: 639 PPPPPSLPNRLVPPPPAPGIGNKF---PAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPP 695
Query: 873 LAPP 884
PP
Sbjct: 696 PLPP 699
>01_06_1377 + 36764461-36765339
Length = 292
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 768 PRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXP 863
P P PPP G + GG S PP P
Sbjct: 176 PPPAYSAPPPPQYGSEQYYRSGGYYSAPPPPP 207
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 672 PXXKXXXPXPPXXFXXFFXPGXGGXGXGXGFF-PRPXXXXXPPP 800
P + P PP PG G G F PRP PPP
Sbjct: 303 PPPQTWGPPPPWGHPSNVPPGGPGYGGNPQFMPPRPQDHYYPPP 346
>06_01_0576 - 4073261-4073821,4073891-4074145
Length = 271
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 693 PXPPXXFXXFFXPGXGGXGXGXGFFPRPXXXXXPPPPXGKXXF 821
P P F G GG G G PRP P P F
Sbjct: 225 PRPKTFFRSLSVGGGGGGGGGKNVTPRPLSTSPSPTPPAPPAF 267
>05_03_0627 -
16342211-16342264,16342332-16342412,16342751-16342849,
16343660-16343770,16343964-16344116,16344741-16344881,
16345456-16345513,16345852-16345967,16346292-16346405,
16346496-16346557,16348788-16348930,16349030-16349097,
16349200-16349379,16349835-16350013,16350447-16350636,
16350920-16350978,16351421-16351574,16352133-16352158,
16352567-16353014
Length = 811
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 802 GGGGXXXXXGRGKXPXPXPXPP 737
GGGG GK P P P PP
Sbjct: 55 GGGGRAPPRAAGKSPAPPPPPP 76
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +2
Query: 782 AXPPPPPRGXXXVLXXWGX---PXPXSPXPXXXXCPPXPF 892
A PPPPP G G P P P CPP P+
Sbjct: 216 APPPPPPCGCSGGHGNCGCGIRPWPPQVWPPPPVCPPPPW 255
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 723 FXPGXGGXGXGXGFFPRPXXXXXPPPPXG 809
+ P GG G G G P P PPP G
Sbjct: 441 YNPNRGGQGGGYGSGPYPQQGRGPPPYPG 469
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,351,018
Number of Sequences: 37544
Number of extensions: 563931
Number of successful extensions: 1779
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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