Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J02
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 36 0.039
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.069
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.069
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.21
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.85
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.85
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.85
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.85
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.0
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.0
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.0
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.6
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 30 2.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 2.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 2.6
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.4
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 3.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 3.4
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 4.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 7.9
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 35.9 bits (79), Expect = 0.039
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 121 LCWLWPTLKETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTVPKADLTSSL 291
LC+LW L T T TT T+ + TTT + T T T T TVP T+++
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTV 238
Query: 292 P 294
P
Sbjct: 239 P 239
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 35.1 bits (77), Expect = 0.069
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 133 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 291
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 35.1 bits (77), Expect = 0.069
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 133 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 291
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +1
Query: 136 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 285
PT + T T TT T+ P TTT ET T +TT T T P T+
Sbjct: 112 PTTETTTTPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTPTTTTTT 160
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 139 TLKETATNLLTTARTSLILPKTTTLMETATNLS-TTVHITWTVPKADLTSS 288
T T T TT T+ P TTT T T + TT T T P + T++
Sbjct: 69 TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +1
Query: 139 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVPKADLTSSLPLS 300
T T T TT T+ +P TTT T T +TT T T P T + S
Sbjct: 198 TTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTS 252
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 136 PTLKETA-TNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPKADLTS 285
PT TA T TT T+ P TTT + T T TT T T P T+
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTT 240
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +1
Query: 139 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 285
T T T TT T+ P TTT T TT T T P T+
Sbjct: 83 TTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 136 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 300
P K+ N+ TT I TTT M T T ST + T T P+ ++P S
Sbjct: 275 PEKKKEVFNVFTTKTNPQI---TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.85
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +3
Query: 672 PXXKXXXPXPPXXFXXFFXPGXGGXGXGXGFFPRPXXXXXPPPPXGKXXFXLXGGXXSPX 851
P P PP G G P P PPPP G GG SP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG--SPP 290
Query: 852 PPXPXXXLAPPXXXG 896
PP PP G
Sbjct: 291 PPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.85
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +3
Query: 672 PXXKXXXPXPPXXFXXFFXPGXGGXGXGXGFFPRPXXXXXPPPPXGKXXFXLXGGXXSPX 851
P P PP G G P P PPPP G GG SP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG--SPP 311
Query: 852 PPXPXXXLAPPXXXG 896
PP PP G
Sbjct: 312 PPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.85
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +3
Query: 672 PXXKXXXPXPPXXFXXFFXPGXGGXGXGXGFFPRPXXXXXPPPPXGKXXFXLXGGXXSPX 851
P P PP G G P P PPPP G GG SP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG--SPP 296
Query: 852 PPXPXXXLAPPXXXG 896
PP PP G
Sbjct: 297 PPRAGSPPPPPPPRG 311
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 139 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 267
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 788 PPPPPRGXXXVLXXWGXPXPXSPXPXXXXCPPXP 889
PPPPP G + G P P P P CPP P
Sbjct: 744 PPPPPGGLPPIS---GGPPPPPPPP--GGCPPPP 772
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Frame = -3
Query: 895 PKXXGGAXXXXGXGGX----GXXXPPXXQNXXXPXGGGGXXXXXGRGKXPXPXPXPPXPG 728
P GG GG G PP P GG G P P P PP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 727 XK 722
K
Sbjct: 780 FK 781
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 768 PRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXPXXXLAP 881
P P PPPP GG P PP +AP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 788 PPPPPRGXXXVLXXWGXPXPXSPXPXXXXCPPXP 889
PPPPP G + G P P P P CPP P
Sbjct: 744 PPPPPGGLPPIS---GGPPPPPPPP--GGCPPPP 772
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Frame = -3
Query: 895 PKXXGGAXXXXGXGGX----GXXXPPXXQNXXXPXGGGGXXXXXGRGKXPXPXPXPPXPG 728
P GG GG G PP P GG G P P P PP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 727 XK 722
K
Sbjct: 780 FK 781
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 768 PRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXPXXXLAP 881
P P PPPP GG P PP +AP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = -3
Query: 895 PKXXGGAXXXXGXGGXGXXXPPXXQNXXXPXGGGGXXXXXGRGKXPXPXPXPPXPGXKXX 716
P GG G G G PP P G GG G G P P PG
Sbjct: 155 PPLMGGGGDPRGPPG-GMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 213
Query: 715 WXXXGG 698
GG
Sbjct: 214 PGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = -3
Query: 895 PKXXGGAXXXXGXGGXGXXXPPXXQNXXXPXGGGGXXXXXGRGKXPXPXPXPPXPGXKXX 716
P GG G G G PP P G GG G G P P PG
Sbjct: 435 PPLMGGGGDPRGPPG-GMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 493
Query: 715 WXXXGG 698
GG
Sbjct: 494 PGGPGG 499
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 788 PPPPPRGXXXVLXXWGXPXPXSPXPXXXXCPPXP 889
PPPPP G + G P P P P CPP P
Sbjct: 327 PPPPPGGLPPIS---GGPPPPPPPP--GGCPPPP 355
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Frame = -3
Query: 895 PKXXGGAXXXXGXGGX----GXXXPPXXQNXXXPXGGGGXXXXXGRGKXPXPXPXPPXPG 728
P GG GG G PP P GG G P P P PP G
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Query: 727 XK 722
K
Sbjct: 363 FK 364
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 768 PRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXPXXXLAP 881
P P PPPP GG P PP +AP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 139 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS-SLPLSLV 306
T T T TT T+ P TTT T T +TT T T P T+ S PL+ V
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLTEV 144
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 49 TLIFSACDNS*SYKNEILHDFPSSLCWLWPT-LKETATNLLTTARTSLILPKTTTLMETA 225
T + D S K + + D W+W + ++A +LL + + TTT T
Sbjct: 336 TFVTLESDRSIREKKKYVCDMKLGGVWIWTVDMDDSAGSLLNASSARPNVTSTTTAPTTE 395
Query: 226 TNLSTTVHITWTVPKADLTSSLPL 297
++ + V T T P +S+ P+
Sbjct: 396 SSTTPPVESTTTAPVTKSSSTPPV 419
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 788 PPPPPRGXXXVLXXWGXPXPXSPXPXXXXCPPXP 889
PPPPP +L P P P P PP P
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 788 PPPPPRGXXXVLXXWGXPXPXSPXPXXXXCPPXP 889
PPPPP + P P P P PP P
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 112 PSSLCWLWPTLKETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTVPKADLTS 285
P+++ PT+ T T ++TT T + +P T + T TN ST V TV T
Sbjct: 353 PNTVVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTVVTVPTTV 412
Query: 286 SLPLSLVL 309
S V+
Sbjct: 413 MTSRSTVI 420
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 759 GFFPRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXPXXXLAPP 884
GFFP P PPPP F G PP P + PP
Sbjct: 294 GFFPPPPRGHFPPPP---PHFMGRGMPPPFMPPPPHFGMGPP 332
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 759 GFFPRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXPXXXLAPP 884
GFFP P PPPP F G PP P + PP
Sbjct: 294 GFFPPPPRGHFPPPP---PHFMGRGMPPPFMPPPPHFGMGPP 332
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 151 TATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTVPKADLTSSLP 294
T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 304 TETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 151 TATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTVPKADLTSS 288
T T TT TS P TTT T T STT T T+ T++
Sbjct: 297 TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 747 GXGXGFFP-RPXXXXXPPPPXGKXXFXLXGGXXSPXPPXPXXXLAPPXXXG 896
G G G P RP PPPP GG +P PP P P G
Sbjct: 23 GLGLGLGPQRPQQCCCPPPPPPPPC---GGGYEAPPPPPPPSYAGGPSYAG 70
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 94 EILHDFPSSLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP-K 270
E++ D P++ T+ T + T T+ PK TT ETAT S+T +T P
Sbjct: 371 EVISDVPTTTVQTSTTVPTTPSKTTATTTTT---PKPTT-TETATTSSSTTTVTTQKPTT 426
Query: 271 ADLTSSLP 294
T++LP
Sbjct: 427 VTSTTTLP 434
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +3
Query: 720 FFXPGXGGXGXGXGFFPRPXXXXXPPPPXGKXXFXLXGGXXSPXPPXP 863
F P GG G G G P PPPP + G P PP P
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPP-------MCGCAPPPPPPPP 58
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 145 KETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVGSK 324
KET T+L T PKTTT++ ++T ST +T +A T++ P + V +K
Sbjct: 442 KETTTSLATEQ------PKTTTIVASSTETST---VTTDATEATTTTTAPTTTVATTTTK 492
Query: 325 E 327
+
Sbjct: 493 K 493
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 136 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 285
P+ T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 136 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 285
P+ T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -3
Query: 883 GGAXXXXGXGGXGXXXPPXXQNXXXPXGGGGXXXXXGRGKXPXPXPXPPXPG 728
GG G GG G GGGG G G P P PP G
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACG 119
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 115 SSLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVPKADLTSSL 291
SSL + T +ET+T TT TS + TT T T +TTV T T+ T++
Sbjct: 250 SSLTAVPGTTEETSTEPETTT-TSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTT 308
Query: 292 P 294
P
Sbjct: 309 P 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,819,700
Number of Sequences: 27780
Number of extensions: 398775
Number of successful extensions: 1524
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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