Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J01
(849 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23H4.09 |cdb4||curved DNA-binding protein Cdb4|Schizosacchar... 97 4e-21
SPBC23E6.05 |arx1||ribosomal export complex Arx1 |Schizosaccharo... 66 8e-12
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 37 0.003
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.039
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.051
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.21
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.36
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.36
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.36
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 27 3.4
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 3.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.4
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 4.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 5.2
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 26 5.9
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 7.8
>SPAC23H4.09 |cdb4||curved DNA-binding protein
Cdb4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 381
Score = 96.7 bits (230), Expect = 4e-21
Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Frame = +3
Query: 165 LXQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSP 344
+ +V+ C P A +IC GD+L+ E KV++ KD+ KGIAF T VS N+ H SP
Sbjct: 36 IKKVVELCQPGAKIYDICVRGDELLNEAIKKVYRT-KDAYKGIAFPTAVSPNDMAAHLSP 94
Query: 345 IASEPD--YXXXXXXXXXXXXXXHIDGFIAVVXHTVLVGESEVSGRXXXXXXXXXXXXXX 518
+ S+P+ HIDGF ++V T +V E V+G
Sbjct: 95 LKSDPEANLALKSGDVVKILLGAHIDGFASLVATTTVVSEEPVTGPAADVIAAASAALKA 154
Query: 519 XXXXXKPATDNYAVXEAIXKIXAEYGCKPIXGMLS 623
KP N+ V + + KI YGCKP+ GMLS
Sbjct: 155 AQRTIKPGNTNWQVTDIVDKIATSYGCKPVAGMLS 189
>SPBC23E6.05 |arx1||ribosomal export complex Arx1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 417
Score = 65.7 bits (153), Expect = 8e-12
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Frame = +3
Query: 156 TESLXQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICH 335
+++ QV ++CVP AS REI +GD L+ E + ++K ++ +KGIA T + VNNC +
Sbjct: 29 SKAFHQVASRCVPGASTREISSYGDNLLHEYKSSIYKSQR-FEKGIAEPTSICVNNCAYN 87
Query: 336 FSP------IASEPDYXXXXXXXXXXXXXXHIDGFIAVVXHTVLV 452
++P ++ Y H DG+ A++ HT++V
Sbjct: 88 YAPGPESVIAGNDNSYHLQVGDVTKISMGLHFDGYTALISHTIVV 132
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 240 LEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASE 356
+E T + +E K GI F T VS+N+C H++P A +
Sbjct: 148 IENTTRALVEEDGLKSGIGFPTGVSLNHCAAHYTPNAGD 186
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 657 TPLXYXPPPXPPPXPXPXXPP 719
TP P P PPP P P PP
Sbjct: 228 TPKQADPLPAPPPPPPPTLPP 248
Score = 27.1 bits (57), Expect(2) = 0.039
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 660 PLXYXPPPXPPPXP 701
P Y PPP PPP P
Sbjct: 184 PSDYNPPPPPPPPP 197
Score = 25.0 bits (52), Expect(2) = 0.039
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 678 PPXPPPXPXPXXPPPPXTXP 737
P P P P PPPP P
Sbjct: 229 PKQADPLPAPPPPPPPTLPP 248
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.051
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +3
Query: 636 PPPXXXDTPLXYXPP-PXPPPXPXPXXPPPPXTXP 737
PPP P P P PPP P PPPP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 6/36 (16%)
Frame = +3
Query: 636 PPPXXXDTPLXYXPPPXPPP------XPXPXXPPPP 725
P P P+ PPP PPP P P PPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.36
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 675 PPPXPPPXPXPXXPPPPXTXP 737
PPP PPP PPPP P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 636 PPPXXXDTPLXYXPPPXPPPXPX--PXXPPPP 725
PPP P+ PPP PP P P PPPP
Sbjct: 1707 PPPP----PMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 576 KIXAEYGCKPIXGMLSXH--LXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPPXTXP 737
K A K GM H PP P PPP P PPPP P
Sbjct: 1668 KDAAALAAKLFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPM-SVPPPPSAPP 1722
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 627 HLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
H+ PPP + P + PPP P PPPP
Sbjct: 219 HMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 250
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 627 HLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
H+ PPP + P + PPP P PPPP
Sbjct: 232 HMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 263
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 627 HLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
H+ PPP + P + PPP P PPPP
Sbjct: 245 HMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 276
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 627 HLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
H+ PPP + P + PPP P PPPP
Sbjct: 258 HMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 289
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 627 HLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
H+ PPP + P + PPP P PPPP
Sbjct: 271 HMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 302
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 627 HLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
H+ PPP + P + PPP P PPPP
Sbjct: 284 HMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 315
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 627 HLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
H+ PPP + P + PPP P PPPP
Sbjct: 297 HMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 328
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 627 HLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
H+ PPP + P + PPP P PPPP
Sbjct: 310 HMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 341
Score = 29.5 bits (63), Expect = 0.63
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 636 PPPXXXDTPLXYXPPPXPPPXPXPXXPPPP 725
PPP P + PPP P PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.36
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 675 PPPXPPPXPXPXXPPPPXTXPXH 743
PPP PPP P PPP P +
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGY 32
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Frame = +3
Query: 675 PPPXPPP--XPXPXXPPPP 725
PPP PPP P PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 675 PPPXPPPXPXPXXPPPPXTXP 737
PP PPP P P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP 25
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 636 PPPXXXDTPLXYXPPPXPPPXPXP 707
PPP P + PP PPP P P
Sbjct: 9 PPPPPP--PPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.36
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 721 GGGXXGWGXG-GGXGGGXYXXGVSXNXGGGXRW 626
GGG G+G G GG GGG G GG W
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -1
Query: 372 SECNPVRSQWAKSDKCSCSQKRMLKM 295
S+C V+ QW+ ++CSCS + +L++
Sbjct: 2139 SKCKTVK-QWSLKERCSCSGEWVLQL 2163
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 151 SEPSPXSKSSQN--AFQTHQQEKYVNLAINLYWRRLTRFSKRRKTP 282
S P+P + N AF T +Q Y N NLY+ ++ S R TP
Sbjct: 460 SLPTPLLGRAVNTTAFPTSRQNAYYNDPWNLYFIHFSKLSPLRFTP 505
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/36 (30%), Positives = 13/36 (36%)
Frame = +3
Query: 630 LXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPPXTXP 737
+ PP P+ PP P P P P P P
Sbjct: 149 IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 675 PPPXPPPXPXPXXPPPP 725
PPP P P P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 594 GCKPIXGMLSXHLXPPPXXXDTPLXYXPPPXPPPXPXPXXPPPPXTXP 737
G PI S PPP P PP PPPP + P
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 675 PPPXPPPXP 701
PPP PPP P
Sbjct: 945 PPPPPPPPP 953
Score = 21.4 bits (43), Expect(2) = 5.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3
Query: 669 YXPPPXPPP 695
+ PPP PPP
Sbjct: 944 FPPPPPPPP 952
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 614 TVNXLTTIFSTYFXNGFXDCIVVXSRLQETKSRFT 510
TVN T+F YF N D ++ ++L+ T + T
Sbjct: 96 TVNLGLTLFKLYFYNKRYDMVITNNKLRMTYTYHT 130
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 736 GCVXGGGGXXGWGXGGGXGGGXYXXGVSXNXGGGXR 629
G GG G G G GG GGG GG R
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGAR 54
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,492,202
Number of Sequences: 5004
Number of extensions: 44358
Number of successful extensions: 358
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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