Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I24
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.     30   9.5  

>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
          Length = 1709

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = +3

Query: 603 PXVSPWQXSPXRXPVPTPAAYPDTWXAFXPSGT---RGPFXLPPRLXXFXPPVYRPPXXH 773
           P  +P Q  P   P P P   P  + A  P G    +  + LPPR     PP Y PP   
Sbjct: 598 PAPTPPQQPPPPPPPPPP---PPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPP 654

Query: 774 P 776
           P
Sbjct: 655 P 655


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,591,237
Number of Sequences: 237096
Number of extensions: 1838415
Number of successful extensions: 5200
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5179
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)