Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_I21
(895 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 2e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 6e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.031
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.51
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.67
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.67
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.8
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 23 6.2
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 6.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.3
SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 26 8.3
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/97 (27%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Frame = +3
Query: 528 PPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQXXP 707
PPP P P P P P G P PP + + A PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV----AVPPVPAPS 1118
Query: 708 XXPXXPXXXTXXPPXP-PSXPPXXPRXNXLPPPXLCP 815
P P PP P PS P P+ + PP P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 37.5 bits (83), Expect = 0.003
Identities = 27/99 (27%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQX 701
P P P PP P P P P G P P A PP
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSV--------AAPPVPV 1135
Query: 702 XPXXPXXPXXXTXXPPXP-PSXPPXXPRXNXLPPPXLCP 815
P P PP P PS P P+ + PP P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 35.1 bits (77), Expect = 0.014
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 7/105 (6%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXX--PXXXXPXGX----RGPXGXPLXGGXXXGPPPXXQTXLGGFGA 683
P P P PP P P P P G + P G PP + G
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 684 PPPTQXXPXXPXXPXXXTXXPPXPP-SXPPXXPRXNXLPPPXLCP 815
PPP++ P P PP PP S P P + PP P
Sbjct: 1192 PPPSEAPPV----PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 34.7 bits (76), Expect = 0.018
Identities = 27/105 (25%), Positives = 31/105 (29%), Gaps = 7/105 (6%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXX--PXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPT 695
P P P PP P P P P G + P APP
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 696 QXXPXXPXXPXXXTXXPPXPP-SXPPXXPRXNX----LPPPXLCP 815
P P PP PP S P P+ + +PPP P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 31.5 bits (68), Expect = 0.17
Identities = 26/94 (27%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 546 PPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQXXPXXPXXP 725
PP P P P P P+ PP ++ G APPP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPP-VPIP----TSTPPVPKSSSGAPSAPPPVPAPSSEIPSI 1076
Query: 726 XXXTXXPPXP-PSXPPXXPRXNXLPPPXLCPXPS 824
+ PP P PS P P+ + PP P PS
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPP--VPKPS 1108
Score = 31.1 bits (67), Expect = 0.22
Identities = 29/108 (26%), Positives = 34/108 (31%), Gaps = 10/108 (9%)
Frame = +3
Query: 531 PPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPP---PTQX 701
PP P P P P + G P P + GAPP P+
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 702 XP------XXPXXPXXXTXXPPXP-PSXPPXXPRXNXLPPPXLCPXPS 824
P P P PP P PS P P+ + PP P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP--VPVPS 1137
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +2
Query: 722 PXXXNXXPPXXXXXAPPXTPXKXXSPPXTLPXXLLXPXPRGGGXPPXFXPPPXXXPRP 895
P P A P P +PP P P P G PP P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +2
Query: 764 APPXTPXKXXSPPXTLPXXLLXPXPRGGGXPPXFXPPPXXXPRP 895
APP +PP P + P P+ P PP P P
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/58 (25%), Positives = 17/58 (29%)
Frame = +2
Query: 722 PXXXNXXPPXXXXXAPPXTPXKXXSPPXTLPXXLLXPXPRGGGXPPXFXPPPXXXPRP 895
P P PP +PP P + P P G PP P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 764 APPXTPXKXXSPPXTLPXXLLXPXPRGGGXPPXFXPPPXXXPRP 895
A P P +PP P P P G PP P P P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/59 (27%), Positives = 17/59 (28%), Gaps = 1/59 (1%)
Frame = +2
Query: 722 PXXXNXXPPXXXXXAPPXTPXKXXSPPXTLPXXLLXPXPR-GGGXPPXFXPPPXXXPRP 895
P P A P P +PP P P P G PP P P P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.5 bits (88), Expect = 6e-04
Identities = 31/99 (31%), Positives = 33/99 (33%), Gaps = 9/99 (9%)
Frame = +3
Query: 531 PPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXG--PPPXXQT-XLGGFGAPPPTQX 701
PPPP PP P G P P G PPP + + APPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 702 XPXXPXXP------XXXTXXPPXPPSXPPXXPRXNXLPP 800
P P T P PPS PP P LPP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAP--PSLPP 433
Score = 34.7 bits (76), Expect = 0.018
Identities = 28/103 (27%), Positives = 29/103 (28%), Gaps = 2/103 (1%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQX 701
P PPP P P P P G P PP L P
Sbjct: 388 PPAPPPAIPGRSAPALP----PLGNASRTSTPPVP-TPPSLPPSAPPSLPPSAPPSLPMG 442
Query: 702 XPXXPXXPXXXTXXPPXPPSXP--PXXPRXNXLPPPXLCPXPS 824
P P P PP P P P P PPP P P+
Sbjct: 443 APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPA 485
Score = 34.3 bits (75), Expect = 0.024
Identities = 30/106 (28%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXRGPXGXP--LXGGXXXGPPPXXQTXLGGFGAPPPT 695
P PPPP P P P P + G PP + PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN---ASRTSTPPV 417
Query: 696 QXXPXXPXXPXXXTXXPP-XPPSXPPXXPRXNXLPP--PXLCPXPS 824
P P P PP PPS P P LPP P P P+
Sbjct: 418 PTPPSLP--PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA 461
Score = 29.1 bits (62), Expect = 0.89
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = +2
Query: 704 PXXTXPPXXXNXXPPXXXXXAPPXTP-XKXXSPPXTLPXXLLXPXPRGGGXPPXFXPPPX 880
P PP PP APP P +PP + P P G P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL-PPAA 473
Query: 881 XXPRP 895
P P
Sbjct: 474 PAPPP 478
Score = 27.9 bits (59), Expect = 2.1
Identities = 24/94 (25%), Positives = 27/94 (28%)
Frame = +3
Query: 528 PPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQXXP 707
PPPPP P P P G G L PPP G PP + P
Sbjct: 311 PPPPPPPSRRNRGKP----PIG-NGSSNSSLP----PPPPPPRSNAAGSIPLPPQGRSAP 361
Query: 708 XXPXXPXXXTXXPPXPPSXPPXXPRXNXLPPPXL 809
P + PP PPP +
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI 395
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/67 (25%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Frame = +2
Query: 695 PXXPXXTXPPXXXNXXP--PXXXXXAPPXTPXKXXSPPXTLPXXLLXPXPRGGGXPPXFX 868
P P P + P P APP P +PP P P PP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 869 PPPXXXP 889
P P
Sbjct: 481 APAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.031
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +3
Query: 531 PPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQXXP 707
PPPP P P P P P+ GG PPP + G G PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPV----PPPAPIMGGP---PPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.89
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 719 PPXXXNXXPPXXXXXAPPXTPXKXXSPPXTLPXXLLXPXPRGGGXPPXFXPPP 877
PP P PP P PP P P G G PP PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP-----PGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.7
Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 9/72 (12%)
Frame = +3
Query: 504 KIFCXXPXPPPP----PXP-PXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQ--- 659
K+ P PPPP P P P P P P G P P G PPP
Sbjct: 726 KLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Query: 660 TXLGG-FGAPPP 692
+ G + AP P
Sbjct: 786 SAGGSRYYAPAP 797
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 767 PPXTPXKXXSPPXTLPXXLLXPXPRGGGXPPXFXPP 874
PP P P P + P P GG PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +3
Query: 690 PTQXXPXXPXXPXXXTXXPPXPPSXPPXXPRXNXLPPPXLCPXPSXS 830
PT P P P PP PP PPP P P+ S
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP--PPPAVS 786
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.51
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 695 PXXPXXTXPPXXXNXXPPXXXXXAPPXTPXKXXSPPXTLPXXLLXPXPRGGGXPPXFXPP 874
P P T P + PP PP P PP P P G PP PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA------PPMPAG---PPSAPPP 1733
Query: 875 P 877
P
Sbjct: 1734 P 1734
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 681 APPPTQXXPXXPXXPXXXTXXPPXPPSXPPXXPRXNXLPPPXL 809
A PP P P P P PPS PP PPP L
Sbjct: 1697 AAPPQMSAPTPPPPPMSV----PPPPSAPPMPAGPPSAPPPPL 1735
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPP 647
P PPPPP P P P P G PL P
Sbjct: 1705 PTPPPPPMSVPPPPSAP--PMPAGPPSAPPPPLPASSAPSVP 1744
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +3
Query: 669 GGFGAPPPTQXXPXXPXXPXXXTXXPPXPPSXPPXXPRXNXLPPPXLCPXPS 824
GG P P P P PP P P PPP P P+
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVP-----PPPSAPPMPA 1725
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.67
Identities = 25/96 (26%), Positives = 26/96 (27%), Gaps = 2/96 (2%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQX 701
P PP P P P P P G PPP G PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP-GEHMPPPPMHH 266
Query: 702 XP--XXPXXPXXXTXXPPXPPSXPPXXPRXNXLPPP 803
P P P PP P + PPP
Sbjct: 267 EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 29.5 bits (63), Expect = 0.67
Identities = 25/96 (26%), Positives = 26/96 (27%), Gaps = 2/96 (2%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQX 701
P PP P P P P P G PPP G PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP-GEHMPPPPMHH 279
Query: 702 XP--XXPXXPXXXTXXPPXPPSXPPXXPRXNXLPPP 803
P P P PP P + PPP
Sbjct: 280 EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 29.5 bits (63), Expect = 0.67
Identities = 25/96 (26%), Positives = 26/96 (27%), Gaps = 2/96 (2%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQX 701
P PP P P P P P G PPP G PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP-GEHMPPPPMHH 292
Query: 702 XP--XXPXXPXXXTXXPPXPPSXPPXXPRXNXLPPP 803
P P P PP P + PPP
Sbjct: 293 EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.5 bits (63), Expect = 0.67
Identities = 25/96 (26%), Positives = 26/96 (27%), Gaps = 2/96 (2%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQX 701
P PP P P P P P G PPP G PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP-GEHMPPPPMHH 305
Query: 702 XP--XXPXXPXXXTXXPPXPPSXPPXXPRXNXLPPP 803
P P P PP P + PPP
Sbjct: 306 EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.67
Identities = 25/98 (25%), Positives = 26/98 (26%)
Frame = +3
Query: 531 PPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQXXPX 710
PP P P R P L G G P A PP+ P
Sbjct: 73 PPVPTGAPSLPTSSNNTQQAEER-PSMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPP 131
Query: 711 XPXXPXXXTXXPPXPPSXPPXXPRXNXLPPPXLCPXPS 824
P P PS PP P P P PS
Sbjct: 132 TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPS 169
Score = 29.5 bits (63), Expect = 0.67
Identities = 27/99 (27%), Positives = 30/99 (30%), Gaps = 1/99 (1%)
Frame = +3
Query: 528 PPPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXGPPPXXQTXLGGFGAPPPTQXXP 707
PP P PP P R P P P P + P P+ P
Sbjct: 124 PPSAPAPPTPQSEL---------RPPTSAPPRPSIPP-PSPASAPPIPSKAPPIPSSLPP 173
Query: 708 XXPXXPXXXTXXPPXPPSXP-PXXPRXNXLPPPXLCPXP 821
P P PP PS P P +PPP L P
Sbjct: 174 --PAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = +3
Query: 645 PPXXQTXLGG-FGAPPPTQXXPXXPXX-PXXXTXXPPXPPS-XPPXXPRXNXLPPPXLCP 815
PP Q+ L APP P P P + PP P S PP P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 816 XPS 824
PS
Sbjct: 190 LPS 192
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 522 PXPPPPPXPPXPXPXXPXXXXPXGXR 599
P PPPPP P P P G R
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPLMTGDR 28
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -1
Query: 616 GXPXGPRXPXGXXXXGXXGXGXGGXGG-GGGXG 521
G P GP G G G GG GG GGG G
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.7
Identities = 23/94 (24%), Positives = 25/94 (26%), Gaps = 3/94 (3%)
Frame = +3
Query: 531 PPPPXPPXPXPXXPXXXXPXGXRGPXGXPLXGGXXXG-PPPXXQTXLGGFGAPPPTQXXP 707
PPPP P P P P G P G P L G P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPLSSMP 1941
Query: 708 XXPXXPXXXTXXPPXPPS--XPPXXPRXNXLPPP 803
P PP + P +PPP
Sbjct: 1942 NAPPSVASNAKLPPASNNRKVDPLEDILQAMPPP 1975
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 528 PPPPPXPPXPXPXXPXXXXPXG 593
PPPPP P P P P G
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 22.6 bits (46), Expect(2) = 6.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 528 PPPPPXPPXP 557
PPPPP P P
Sbjct: 241 PPPPPRPSQP 250
Score = 21.8 bits (44), Expect(2) = 6.2
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 507 IFCXXPXPPPPPXPP 551
IF PPPPP P
Sbjct: 233 IFSSSSTPPPPPPRP 247
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 684 PPPTQXXPXXPXXPXXXTXXPPXPPSXPPXXP 779
PPPT+ P P P T P P S PP P
Sbjct: 51 PPPTRRLPRKP-LPFRSTSLQP-PSSQPPAPP 80
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 684 PPPTQXXPXXPXXPXXXTXXPPX-PPSXPPXXPRXNXLPPPXLCPXP 821
PP T P P P P S PP P LPP P P
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFP 540
>SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 247 SAHFFNFS*RSSTWGSGAALVMLKASTRAKTKDRIFCEIHCKFYVNSNAD 98
+A +N++ SS W + +M KA T D+I E C+ + N+D
Sbjct: 314 TAFLYNYTNGSSVWQTHMEGLMNKALDYYFTSDKIIYEPSCEPTESCNSD 363
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,479,175
Number of Sequences: 5004
Number of extensions: 44829
Number of successful extensions: 344
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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