Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I21
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   5.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 528  PPPPPXPP 551
            PPPPP PP
Sbjct: 1355 PPPPPPPP 1362



 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 84  RRCTDHFDVHYXECQILRIP 25
           +R T   ++H   C++LRIP
Sbjct: 89  QRLTSLHELHVHGCKVLRIP 108


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 522 PXPPPPPXPP 551
           P P PPP PP
Sbjct: 339 PKPAPPPPPP 348



 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 531 PPPPXPPXPXP 563
           PP P PP P P
Sbjct: 338 PPKPAPPPPPP 348


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 141 KILSFVFALVLALSMTSAAPEPQVEDLQEKLKKWAETF 254
           K+L+  F  +L + + +   +P  E   E+L+   ET+
Sbjct: 140 KVLANEFLSILPIFLYALGEQPLTEQNLEELRDLKETY 177


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 141 KILSFVFALVLALSMTSAAPEPQVEDLQEKLKKWAETF 254
           K+L+  F  +L + + +   +P  E   E+L+   ET+
Sbjct: 178 KVLANEFLSILPIFLYALGEQPLTEQNLEELRDLKETY 215


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/27 (33%), Positives = 10/27 (37%)
 Frame = +2

Query: 692 NPXXPXXTXPPXXXNXXPPXXXXXAPP 772
           +P  P    PP      PP     APP
Sbjct: 30  SPQAPQRGSPPNPSQGPPPGGPPGAPP 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,989
Number of Sequences: 438
Number of extensions: 6468
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)