Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I17
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    27   0.30 
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    27   0.30 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    27   0.30 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   8.5  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 199 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 315
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 199 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 315
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 199 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 315
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -1

Query: 669 VINVPPRNSQLXRSA--SIAAAEKHTNTRLVPSRAVIMIDGSTTLTYSSR 526
           V+N+   ++ + R++  S+        + ++ +R V+  DGS T  YSS+
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -1

Query: 669 VINVPPRNSQLXRSA--SIAAAEKHTNTRLVPSRAVIMIDGSTTLTYSSR 526
           V+N+   ++ + R++  S+        + ++ +R V+  DGS T  YSS+
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -1

Query: 294 NWWFQSILKAVDKGLKI 244
           NW  Q ++K+++KG ++
Sbjct: 841 NWSNQDVIKSIEKGYRL 857


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 600 TNTRLVPSRAVIMIDGSTTLTY 535
           TNT L P+  +++ + +TT+ +
Sbjct: 326 TNTELNPNTFILVAENNTTMVF 347


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 24  RESLRFVTXHILYSAERKLFCLFYL 98
           RE + F    +   ++R L C+F+L
Sbjct: 414 RERMEFDWKQVALVSDRALLCVFFL 438


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,980
Number of Sequences: 438
Number of extensions: 4479
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)