Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_I15
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 192 3e-49
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 192 3e-49
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 192 3e-49
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 192 3e-49
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 190 8e-49
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 189 2e-48
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 188 6e-48
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 186 1e-47
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 186 1e-47
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 186 1e-47
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 186 1e-47
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 186 2e-47
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 186 2e-47
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 182 3e-46
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 182 3e-46
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 130 1e-30
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 62 4e-10
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 62 5e-10
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 62 5e-10
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 62 5e-10
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 44 2e-04
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 192 bits (468), Expect = 3e-49
Identities = 92/115 (80%), Positives = 96/115 (83%)
Frame = -1
Query: 560 PRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVXPGGDLAKVQRAVCMLSNTTAI 381
P++V AAI + PTGFKVGI YQPPTV PGGDLAKV RAVCMLSNTTAI
Sbjct: 325 PKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAI 384
Query: 380 AEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 216
AEAWARLDHKFDLMYAK AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 385 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 35.1 bits (77), Expect = 0.065
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN EP NQM K DPR + + + RGDV PK+
Sbjct: 291 ITNMCFEPHNQMVKCDPRHGKYMAVCLLF-RGDVVPKD 327
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 706 AEXAYHEQVSVAGXHKRMXGAXQPDGEM--GPPXXAXTXACCMXYPW*RRTQGMXTRPSX 533
AE AYHEQ+SVA +P +M P A C+ + + + +
Sbjct: 278 AEKAYHEQLSVAEITNM---CFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIA- 333
Query: 532 TIXTKXTIQFVDXVQPVSRSVSXTSHPP 449
TI TK +IQFVD P V PP
Sbjct: 334 TIKTKRSIQFVDWC-PTGFKVGINYQPP 360
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 192 bits (468), Expect = 3e-49
Identities = 92/115 (80%), Positives = 96/115 (83%)
Frame = -1
Query: 560 PRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVXPGGDLAKVQRAVCMLSNTTAI 381
P++V AAI + PTGFKVGI YQPPTV PGGDLAKV RAVCMLSNTTAI
Sbjct: 324 PKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAI 383
Query: 380 AEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 216
AEAWARLDHKFDLMYAK AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 384 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 438
Score = 35.1 bits (77), Expect = 0.065
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN EP NQM K DPR + + + RGDV PK+
Sbjct: 290 ITNMCFEPHNQMVKCDPRHGKYMAVCLLF-RGDVVPKD 326
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 706 AEXAYHEQVSVAGXHKRMXGAXQPDGEM--GPPXXAXTXACCMXYPW*RRTQGMXTRPSX 533
AE AYHEQ+SVA +P +M P A C+ + + + +
Sbjct: 277 AEKAYHEQLSVAEITNM---CFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIA- 332
Query: 532 TIXTKXTIQFVDXVQPVSRSVSXTSHPP 449
TI TK +IQFVD P V PP
Sbjct: 333 TIKTKRSIQFVDWC-PTGFKVGINYQPP 359
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 192 bits (468), Expect = 3e-49
Identities = 92/115 (80%), Positives = 96/115 (83%)
Frame = -1
Query: 560 PRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVXPGGDLAKVQRAVCMLSNTTAI 381
P++V AAI + PTGFKVGI YQPPTV PGGDLAKV RAVCMLSNTTAI
Sbjct: 325 PKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAI 384
Query: 380 AEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 216
AEAWARLDHKFDLMYAK AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 385 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 35.1 bits (77), Expect = 0.065
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN EP NQM K DPR + + + RGDV PK+
Sbjct: 291 ITNMCFEPHNQMVKCDPRHGKYMAVCLLF-RGDVVPKD 327
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 706 AEXAYHEQVSVAGXHKRMXGAXQPDGEM--GPPXXAXTXACCMXYPW*RRTQGMXTRPSX 533
AE AYHEQ+SVA +P +M P A C+ + + + +
Sbjct: 278 AEKAYHEQLSVAEITNM---CFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIA- 333
Query: 532 TIXTKXTIQFVDXVQPVSRSVSXTSHPP 449
TI TK +IQFVD P V PP
Sbjct: 334 TIKTKRSIQFVDWC-PTGFKVGINYQPP 360
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 192 bits (468), Expect = 3e-49
Identities = 92/115 (80%), Positives = 96/115 (83%)
Frame = -1
Query: 560 PRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVXPGGDLAKVQRAVCMLSNTTAI 381
P++V AAI + PTGFKVGI YQPPTV PGGDLAKV RAVCMLSNTTAI
Sbjct: 325 PKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAI 384
Query: 380 AEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 216
AEAWARLDHKFDLMYAK AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 385 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 35.1 bits (77), Expect = 0.065
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN EP NQM K DPR + + + RGDV PK+
Sbjct: 291 ITNMCFEPHNQMVKCDPRHGKYMAVCLLF-RGDVVPKD 327
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 706 AEXAYHEQVSVAGXHKRMXGAXQPDGEM--GPPXXAXTXACCMXYPW*RRTQGMXTRPSX 533
AE AYHEQ+SVA +P +M P A C+ + + + +
Sbjct: 278 AEKAYHEQLSVAEITNM---CFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIA- 333
Query: 532 TIXTKXTIQFVDXVQPVSRSVSXTSHPP 449
TI TK +IQFVD P V PP
Sbjct: 334 TIKTKRSIQFVDWC-PTGFKVGINYQPP 360
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 190 bits (464), Expect = 8e-49
Identities = 97/136 (71%), Positives = 104/136 (76%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AAI + PTGFKVGI YQPPTV
Sbjct: 312 PRRGKYMACCLLYRGDVV---PKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVV 368
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PG DL+K+QRAVCMLSNTTAIAEAWARLDHKFDLMYAK AFVHWYVGEGMEEGEFSEARE
Sbjct: 369 PGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 428
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDYEEVG+D+
Sbjct: 429 DLAALEKDYEEVGLDA 444
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
IT EP QM K DPR + + RGDV PK+
Sbjct: 296 ITQQCFEPGAQMVKCDPRRGKYMACCLLY-RGDVVPKD 332
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 189 bits (461), Expect = 2e-48
Identities = 95/136 (69%), Positives = 103/136 (75%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P+ + +AI + PTGFKVGI YQPPTV
Sbjct: 307 PRNGKYMACCLLYRGDVV---PKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVV 363
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGD+AK+QRAVCMLSNTTAI EAWARLDHKFDLMYAK AFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 263 DLAALEKDYEEVGMDS 216
D+AALEKDYEEVG+DS
Sbjct: 424 DMAALEKDYEEVGVDS 439
Score = 35.5 bits (78), Expect = 0.050
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN EP +QM K DPR+ + + RGDV PKE
Sbjct: 291 ITNVCFEPGSQMVKCDPRNGKYMACCLLY-RGDVVPKE 327
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 188 bits (457), Expect = 6e-48
Identities = 97/136 (71%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AAI Q PTGFKVG+ YQPPTV
Sbjct: 302 PKHGKYMAVCLLYRGDVV---PKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVI 358
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGD+AKV RAVCMLSNTTAIAEAW RLD+KFDLMYAK AFVHWYVGEGMEEGEFSEARE
Sbjct: 359 PGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 418
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDYEEVG DS
Sbjct: 419 DLAALEKDYEEVGADS 434
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
IT + E +NQM K DP+ + + + RGDV PK+
Sbjct: 286 ITKSCFEASNQMVKCDPKHGKYMAVCLLY-RGDVVPKD 322
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 186 bits (454), Expect = 1e-47
Identities = 96/136 (70%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AI + PTGFKVGI YQPPTV
Sbjct: 305 PRHGKYMAVCLLYRGDVV---PKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVV 361
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAK AFVHWYVGEGMEEGEF+EARE
Sbjct: 362 PGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEARE 421
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDYEEVG DS
Sbjct: 422 DLAALEKDYEEVGADS 437
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN+ EPANQM K DPR + + + RGDV PK+
Sbjct: 289 ITNSCFEPANQMVKCDPRHGKYMAVCLLY-RGDVVPKD 325
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 186 bits (454), Expect = 1e-47
Identities = 96/136 (70%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AI + PTGFKVGI YQPPTV
Sbjct: 305 PRHGKYMAVCLLYRGDVV---PKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVV 361
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAK AFVHWYVGEGMEEGEF+EARE
Sbjct: 362 PGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEARE 421
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDYEEVG DS
Sbjct: 422 DLAALEKDYEEVGADS 437
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN+ EPANQM K DPR + + + RGDV PK+
Sbjct: 289 ITNSCFEPANQMVKCDPRHGKYMAVCLLY-RGDVVPKD 325
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 186 bits (454), Expect = 1e-47
Identities = 96/136 (70%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AI + PTGFKVGI YQPPTV
Sbjct: 305 PRHGKYMAVCLLYRGDVV---PKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVV 361
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAK AFVHWYVGEGMEEGEF+EARE
Sbjct: 362 PGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEARE 421
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDYEEVG DS
Sbjct: 422 DLAALEKDYEEVGADS 437
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN+ EPANQM K DPR + + + RGDV PK+
Sbjct: 289 ITNSCFEPANQMVKCDPRHGKYMAVCLLY-RGDVVPKD 325
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 186 bits (454), Expect = 1e-47
Identities = 96/136 (70%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AI + PTGFKVGI YQPPTV
Sbjct: 305 PRHGKYMAVCLLYRGDVV---PKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVV 361
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAK AFVHWYVGEGMEEGEF+EARE
Sbjct: 362 PGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEARE 421
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDYEEVG DS
Sbjct: 422 DLAALEKDYEEVGADS 437
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN+ EPANQM K DPR + + + RGDV PK+
Sbjct: 289 ITNSCFEPANQMVKCDPRHGKYMAVCLLY-RGDVVPKD 325
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 186 bits (452), Expect = 2e-47
Identities = 96/136 (70%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AI + PTGFKVGI YQPPTV
Sbjct: 305 PRNGKYMAVCLLYRGDVV---PKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVV 361
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAK AFVHWYVGEGMEEGEF+EARE
Sbjct: 362 PGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEARE 421
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDYEEVG DS
Sbjct: 422 DLAALEKDYEEVGADS 437
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN+ EPANQM K DPR+ + + + RGDV PK+
Sbjct: 289 ITNSCFEPANQMVKCDPRNGKYMAVCLLY-RGDVVPKD 325
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 186 bits (452), Expect = 2e-47
Identities = 96/136 (70%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AI + PTGFKVGI YQPPTV
Sbjct: 305 PRNGKYMAVCLLYRGDVV---PKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVV 361
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAK AFVHWYVGEGMEEGEF+EARE
Sbjct: 362 PGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEARE 421
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDYEEVG DS
Sbjct: 422 DLAALEKDYEEVGADS 437
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
ITN+ EPANQM K DPR+ + + + RGDV PK+
Sbjct: 289 ITNSCFEPANQMVKCDPRNGKYMAVCLLY-RGDVVPKD 325
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 182 bits (443), Expect = 3e-46
Identities = 91/135 (67%), Positives = 100/135 (74%), Gaps = 2/135 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P+++ +AI + PTGFKVGI YQPPTV
Sbjct: 313 PRRGKYMAVCLLYRGDVV---PKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVV 369
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGDL K R+VCM+SNTTAIAEAWARLDHKFDLMYAK AFVHWYVGEGMEEGEFSEARE
Sbjct: 370 PGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 429
Query: 263 DLAALEKDYEEVGMD 219
D+AALEKDYEE+G D
Sbjct: 430 DMAALEKDYEEIGED 444
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
+T+A EP QM K DPR + + + RGDV PK+
Sbjct: 297 MTHACFEPGYQMVKCDPRRGKYMAVCLLY-RGDVVPKD 333
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 182 bits (443), Expect = 3e-46
Identities = 91/135 (67%), Positives = 100/135 (74%), Gaps = 2/135 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P+++ +AI + PTGFKVGI YQPPTV
Sbjct: 285 PRRGKYMAVCLLYRGDVV---PKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVV 341
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
PGGDL K R+VCM+SNTTAIAEAWARLDHKFDLMYAK AFVHWYVGEGMEEGEFSEARE
Sbjct: 342 PGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 401
Query: 263 DLAALEKDYEEVGMD 219
D+AALEKDYEE+G D
Sbjct: 402 DMAALEKDYEEIGED 416
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
+T+A EP QM K DPR + + + RGDV PK+
Sbjct: 269 MTHACFEPGYQMVKCDPRRGKYMAVCLLY-RGDVVPKD 305
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 169 bits (411), Expect = 2e-42
Identities = 89/136 (65%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Frame = -1
Query: 617 PXXGKXXG--LLYXVPVVTSXPRNVXAAIGYHXNQXYYPIRXLXPTGFKVGIXYQPPTVX 444
P GK LLY VV P++V AAI + PTGFKVGI YQ P
Sbjct: 310 PSAGKYMAVCLLYRGDVV---PKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITV 366
Query: 443 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEARE 264
GGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMY+K AFVHW+VGEGMEEGEF EAR+
Sbjct: 367 EGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARD 426
Query: 263 DLAALEKDYEEVGMDS 216
DLAALEKDY EV D+
Sbjct: 427 DLAALEKDYAEVSRDT 442
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 666 ITNAWXEPANQMXKWDPRSXQXXGLAVXXTRGDVXPKE 553
IT+ E ANQM K DP + + + + RGDV PK+
Sbjct: 294 ITHMCFEKANQMVKCDPSAGKYMAVCLLY-RGDVVPKD 330
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 130 bits (315), Expect = 1e-30
Identities = 59/65 (90%), Positives = 63/65 (96%)
Frame = -1
Query: 410 VCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 231
VCMLS+TTAIAEAW+RLD+KFDLMYAK AFVHWYVGEGMEEGEF+EAREDLAALEKDYEE
Sbjct: 10 VCMLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
Query: 230 VGMDS 216
VG DS
Sbjct: 70 VGADS 74
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = -1
Query: 422 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEK 243
V+ A + N+TAI E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 VKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 242 DYEE 231
+Y++
Sbjct: 421 EYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 62.5 bits (145), Expect = 4e-10
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = -1
Query: 422 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEK 243
++ A + N+TAI E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
Query: 242 DYEE 231
+Y++
Sbjct: 421 EYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 62.5 bits (145), Expect = 4e-10
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = -1
Query: 422 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEK 243
++ A + N+TAI E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
Query: 242 DYEE 231
+Y++
Sbjct: 421 EYQQ 424
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = -1
Query: 422 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEK 243
++ + + N+TAI E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 242 DYEE 231
+Y++
Sbjct: 421 EYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = -1
Query: 422 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEK 243
++ + + N+TAI E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 242 DYEE 231
+Y++
Sbjct: 421 EYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = -1
Query: 422 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAREDLAALEK 243
++ + + N+TAI E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 242 DYEE 231
+Y++
Sbjct: 421 EYQQ 424
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = -1
Query: 422 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAR---EDLAA 252
++ + ++N+TAI E R+ +F ++ + AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 251 LEKDYEEV 228
+ YE+V
Sbjct: 416 EFQQYEKV 423
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = -1
Query: 422 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKXAFVHWYVGEGMEEGEFSEAR---EDLAA 252
++ + ++N+TAI E R+ +F ++ + AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 251 LEKDYEEV 228
+ YE+V
Sbjct: 416 EFQQYEKV 423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,639
Number of Sequences: 27780
Number of extensions: 254809
Number of successful extensions: 624
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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