Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I13
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    29   6.4  
04_03_0813 - 19929562-19929798,19930209-19930580,19930686-199310...    29   6.4  
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768...    28   8.5  

>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPXSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>04_03_0813 - 19929562-19929798,19930209-19930580,19930686-19931039,
            19931120-19931188,19931294-19931479,19932762-19932989,
            19933655-19934020,19934154-19934354,19934923-19935093,
            19935178-19935285,19935423-19935635,19936093-19936299,
            19936485-19936586,19936714-19936902,19937766-19937933
          Length = 1056

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -1

Query: 462  SCVIPLILWITVLPPLSELIPLAAAERPSAASQ*XRKRKSAQYANRLSPRVGRFINA 292
            SC+ P+ L I+ +PPL++L  LA  + PS        +++A Y N +    GR   A
Sbjct: 883  SCLRPINLSISSIPPLAKLCSLAFVKVPSLND--YLGQEAAMYLNSILLDNGREFEA 937


>02_04_0480 -
           23274945-23275196,23275558-23275623,23276709-23276851,
           23276947-23277063,23277219-23278683,23279561-23280730
          Length = 1070

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 74  GDPRPRKYQHLNLKNSL*XDGNE 6
           GD   +KY H ++KN+L  D NE
Sbjct: 34  GDDEEKKYSHHDMKNNLRNDANE 56


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,049,061
Number of Sequences: 37544
Number of extensions: 345092
Number of successful extensions: 1100
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)