Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I13
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81057-5|CAB02917.2|  846|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    26   6.3  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    26   6.4  
Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    28   7.5  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    28   7.5  
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    28   7.5  

>Z81057-5|CAB02917.2|  846|Caenorhabditis elegans Hypothetical
           protein F10D11.6 protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 580 DLSVDFCDAGQGGGAYGKTPATXPFYG 500
           DL+ +F   GQGG  +G  P   P+YG
Sbjct: 476 DLTGEFSPYGQGGTPFGPFPTQFPYYG 502


>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 752 GXRXGGKGXNRFPERGEKXGXRY 684
           G R GG G +RF +RG + G RY
Sbjct: 177 GGRFGGGGGDRFNDRGSRGGDRY 199


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 25.8 bits (54), Expect(2) = 6.3
 Identities = 18/62 (29%), Positives = 22/62 (35%)
 Frame = +2

Query: 620 PXPPSNLPRALSXSDPWPV*PHTXFRPFLPFRGSGXRPXLLXSXPGXXXXXSRCYAPSPP 799
           P PPS+  R ++ S P P  P+       P       P       G     S    P PP
Sbjct: 576 PPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPP 635

Query: 800 PP 805
           PP
Sbjct: 636 PP 637



 Score = 21.0 bits (42), Expect(2) = 6.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 788 PSPPPPLGA 814
           P PPPP GA
Sbjct: 652 PPPPPPSGA 660


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 25.8 bits (54), Expect(2) = 6.4
 Identities = 18/62 (29%), Positives = 22/62 (35%)
 Frame = +2

Query: 620 PXPPSNLPRALSXSDPWPV*PHTXFRPFLPFRGSGXRPXLLXSXPGXXXXXSRCYAPSPP 799
           P PPS+  R ++ S P P  P+       P       P       G     S    P PP
Sbjct: 402 PPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPP 461

Query: 800 PP 805
           PP
Sbjct: 462 PP 463



 Score = 21.0 bits (42), Expect(2) = 6.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 788 PSPPPPLGA 814
           P PPPP GA
Sbjct: 478 PPPPPPSGA 486


>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 528 KRQXRGLFTVXGLLXAFCSHVLSCV-IPLILWITVL 424
           +RQ      +  +  A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 528 KRQXRGLFTVXGLLXAFCSHVLSCV-IPLILWITVL 424
           +RQ      +  +  A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 528 KRQXRGLFTVXGLLXAFCSHVLSCV-IPLILWITVL 424
           +RQ      +  +  A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,789,229
Number of Sequences: 27780
Number of extensions: 249961
Number of successful extensions: 636
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)