Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I12
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947...    31   0.89 
10_08_0810 + 20734490-20734606,20735182-20735433,20735521-207356...    30   2.7  
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275...    30   2.7  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    30   2.7  
08_02_1438 + 27108359-27108889                                         29   3.6  
07_03_1148 - 24363952-24365086,24365178-24365361,24365438-243654...    29   4.7  
01_01_0160 + 1382646-1383162,1383255-1383402,1383475-1383958,138...    29   6.3  
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166           28   8.3  

>04_04_1465 +
           33794225-33794389,33794471-33794597,33794669-33794799,
           33795153-33795254,33795337-33795420,33795504-33795731,
           33795934-33796038,33796376-33796731,33797146-33797303,
           33797399-33797505,33797852-33798061
          Length = 590

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 302 VAVVEVGGP--DGAEHVLVVAGERDLQGGPGGSVRV 201
           VA V  GGP  DGA+ V+ V     L G P GS RV
Sbjct: 91  VAYVTTGGPIPDGADAVVQVEDTEQLAGAPDGSKRV 126


>10_08_0810 +
           20734490-20734606,20735182-20735433,20735521-20735664,
           20735774-20736493,20736955-20737177,20737463-20737523,
           20738294-20738615
          Length = 612

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 22/72 (30%), Positives = 26/72 (36%)
 Frame = -2

Query: 410 KPPARSTMSSILYTSCQ*VGTHTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDL 231
           +P A     + L  S     TH        GG    V V   GG  GA  V +V GE +L
Sbjct: 488 EPTAAKPAQARLKPSILKRSTHRRQPLRHGGGGGVTVVVSRGGGGGGAARVKIVVGEDEL 547

Query: 230 QGGPGGSVRVHC 195
                G  R  C
Sbjct: 548 DRIAAGVTRRQC 559


>07_01_0370 +
           2749353-2749786,2749949-2750346,2750435-2750519,
           2751200-2751314,2751538-2751591
          Length = 361

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 314 SAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 159
           +A L + V + G   A  V++ AG R   GG GG V VH  AA  SP  T RH
Sbjct: 3   AARLASTV-LAGRRRAASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -1

Query: 501 CDAELLPEAGNAGPGQAQPVPVSATWTNEHEA 406
           C A LLPE GN G GQ+    V+ +  NE EA
Sbjct: 486 CSATLLPEEGNTGDGQSP--KVNRSIANEVEA 515


>08_02_1438 + 27108359-27108889
          Length = 176

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 320 GGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSVRV 201
           GG  E V  VE    DGA  +L V  E+++    GG VRV
Sbjct: 79  GGVREAVRCVEYVDDDGAVLLLTVTTEKEVAVVDGGEVRV 118


>07_03_1148 -
           24363952-24365086,24365178-24365361,24365438-24365474,
           24365585-24365818
          Length = 529

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 332 ASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSV 207
           A+PCGG  E   +  +GG D    V+++ GE  L  GPGG +
Sbjct: 452 AAPCGGRREEYHLSPLGG-DIRSQVVLLNGEA-LALGPGGEI 491


>01_01_0160 +
           1382646-1383162,1383255-1383402,1383475-1383958,
           1383986-1384084
          Length = 415

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +1

Query: 583 SQRAQLQHAGRGEWTTC---SSEYLCSSVNTEM 672
           +QR +   AG G WT C   ++ Y+ SSV T+M
Sbjct: 382 NQRVETLKAGIGSWTECGELNTPYMSSSVFTDM 414


>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
          Length = 545

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 212 SVRVHCEAAGLSPRTCRHVST 150
           S+R+HC A  L+PR CR   T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,008,386
Number of Sequences: 37544
Number of extensions: 401196
Number of successful extensions: 1252
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)