Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I12
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL596222-1|CAH70182.1| 2471|Homo sapiens Notch homolog 2 (Drosop...    33   1.0  
AL512503-1|CAH72483.1| 2471|Homo sapiens Notch homolog 2 (Drosop...    33   1.0  
AL359752-4|CAI18974.1| 2471|Homo sapiens Notch homolog 2 (Drosop...    33   1.0  
AK027869-1|BAB55419.1|  773|Homo sapiens protein ( Homo sapiens ...    33   1.0  
AF315356-1|AAG37073.1| 2471|Homo sapiens NOTCH2 protein protein.       33   1.0  
AF308601-1|AAA36377.2| 2471|Homo sapiens NOTCH 2 protein.              33   1.0  
DQ016609-1|AAY21823.1|  387|Homo sapiens FOXL2 protein.                32   2.3  

>AL596222-1|CAH70182.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
            protein.
          Length = 2471

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 546  GAQXVVVIVEQXDLACDAELLPEAGNAGP-GQAQPVPVSATWTNEHEATSPEHNEQY 379
            GA  V+  V Q  L+    + P +G+AG   +  PVPV A W N  E    ++NE +
Sbjct: 2213 GASTVLPSVSQL-LSHHHIVSPGSGSAGSLSRLHPVPVPADWMNRMEVNETQYNEMF 2268


>AL512503-1|CAH72483.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
            protein.
          Length = 2471

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 546  GAQXVVVIVEQXDLACDAELLPEAGNAGP-GQAQPVPVSATWTNEHEATSPEHNEQY 379
            GA  V+  V Q  L+    + P +G+AG   +  PVPV A W N  E    ++NE +
Sbjct: 2213 GASTVLPSVSQL-LSHHHIVSPGSGSAGSLSRLHPVPVPADWMNRMEVNETQYNEMF 2268


>AL359752-4|CAI18974.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
            protein.
          Length = 2471

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 546  GAQXVVVIVEQXDLACDAELLPEAGNAGP-GQAQPVPVSATWTNEHEATSPEHNEQY 379
            GA  V+  V Q  L+    + P +G+AG   +  PVPV A W N  E    ++NE +
Sbjct: 2213 GASTVLPSVSQL-LSHHHIVSPGSGSAGSLSRLHPVPVPADWMNRMEVNETQYNEMF 2268


>AK027869-1|BAB55419.1|  773|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14963 fis, clone PLACE4000522, weakly similar to
           NEUROGENIC LOCUS NOTCH PROTEIN. ).
          Length = 773

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 546 GAQXVVVIVEQXDLACDAELLPEAGNAGP-GQAQPVPVSATWTNEHEATSPEHNEQY 379
           GA  V+  V Q  L+    + P +G+AG   +  PVPV A W N  E    ++NE +
Sbjct: 515 GASTVLPSVSQL-LSHHHIVSPGSGSAGSLSRLHPVPVPADWMNRMEVNETQYNEMF 570


>AF315356-1|AAG37073.1| 2471|Homo sapiens NOTCH2 protein protein.
          Length = 2471

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 546  GAQXVVVIVEQXDLACDAELLPEAGNAGP-GQAQPVPVSATWTNEHEATSPEHNEQY 379
            GA  V+  V Q  L+    + P +G+AG   +  PVPV A W N  E    ++NE +
Sbjct: 2213 GASTVLPSVSQL-LSHHHIVSPGSGSAGSLSRLHPVPVPADWMNRMEVNETQYNEMF 2268


>AF308601-1|AAA36377.2| 2471|Homo sapiens NOTCH 2 protein.
          Length = 2471

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 546  GAQXVVVIVEQXDLACDAELLPEAGNAGP-GQAQPVPVSATWTNEHEATSPEHNEQY 379
            GA  V+  V Q  L+    + P +G+AG   +  PVPV A W N  E    ++NE +
Sbjct: 2213 GASTVLPSVSQL-LSHHHIVSPGSGSAGSLSRLHPVPVPADWMNRMEVNETQYNEMF 2268


>DQ016609-1|AAY21823.1|  387|Homo sapiens FOXL2 protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 20/70 (28%), Positives = 26/70 (37%)
 Frame = -2

Query: 452 LSPCPFLQHGQTNMKPPARSTMSSILYTSCQ*VGTHTLSRASPCGGSAELVAVVEVGGPD 273
           L+P  +LQ G  N   P     S + Y SCQ       + A+    +A   A     GP 
Sbjct: 189 LAPPKYLQSGFLNNSWPLPQPPSPMPYASCQMAAAAAAAAAAAAAAAAAAAAAAAAAGPG 248

Query: 272 GAEHVLVVAG 243
                 VV G
Sbjct: 249 SPGAAAVVKG 258


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,197,966
Number of Sequences: 237096
Number of extensions: 2014495
Number of successful extensions: 16438
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16437
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)