Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I12
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    25   0.89 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    25   0.89 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.3  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 469 CGSRSGSARARFCNMDKRT*SHQPGAQ*AVYCILAA 362
           C S  G+ +A+  ++DK    ++P     +YC+L A
Sbjct: 45  CMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEA 80


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 469 CGSRSGSARARFCNMDKRT*SHQPGAQ*AVYCILAA 362
           C S  G+ +A+  ++DK    ++P     +YC+L A
Sbjct: 45  CMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEA 80


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 453 AQPVPVSATWTNEHEATSPEHN 388
           AQP   + TW NE +A + E N
Sbjct: 48  AQPALANITWYNEGQAWNIEAN 69


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 453 AQPVPVSATWTNEHEATSPEHN 388
           AQP   + TW NE +A + E N
Sbjct: 48  AQPALANITWYNEGQAWNIEAN 69


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 349 VPTYWQLVYNILLIVLRAG 405
           +PT+   +  +L+I+LRAG
Sbjct: 48  IPTWLSFIRIVLVILLRAG 66


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 604 HAGRGEWTTCSSEYLCSSV 660
           HAG  E T CS +    SV
Sbjct: 31  HAGNAEKTLCSGQVCLGSV 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,427
Number of Sequences: 438
Number of extensions: 3207
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)