Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I09
         (1118 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1667 + 28484069-28484071,28484151-28484240,28484339-284844...    46   4e-05
05_01_0401 + 3169979-3169981,3170071-3170160,3170556-3170684,317...    46   5e-05
03_02_0954 - 12687373-12687582,12688885-12689067,12689160-126892...    44   2e-04
01_05_0175 - 18936752-18937621,18938855-18941641                       29   5.1  

>07_03_1667 +
           28484069-28484071,28484151-28484240,28484339-28484491,
           28484575-28484757,28486137-28486295
          Length = 195

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +3

Query: 552 TEKARARILAAGGEILTFDQLALRAP 629
           TE ARARI+ AGGE LTFDQLALRAP
Sbjct: 113 TETARARIINAGGECLTFDQLALRAP 138


>05_01_0401 +
           3169979-3169981,3170071-3170160,3170556-3170684,
           3170814-3170999,3172001-3172159
          Length = 188

 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +3

Query: 552 TEKARARILAAGGEILTFDQLALRAP 629
           TE ARARI+ AGGE LTFDQLALRAP
Sbjct: 106 TETARARIVNAGGECLTFDQLALRAP 131


>03_02_0954 -
           12687373-12687582,12688885-12689067,12689160-12689288,
           12689375-12689464,12689548-12689550
          Length = 204

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = +3

Query: 552 TEKARARILAAGGEILTFDQLALRAP 629
           TE ARARI+  GGE LTFDQLALRAP
Sbjct: 105 TETARARIVNTGGECLTFDQLALRAP 130


>01_05_0175 - 18936752-18937621,18938855-18941641
          Length = 1218

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 593 NSYF*SAGSSCSRTGKKTVLVQGSAKMLVRQCVHFG 700
           NSYF   GS  S T K T ++ G+  +    C+H G
Sbjct: 814 NSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPG 849


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,279,690
Number of Sequences: 37544
Number of extensions: 605912
Number of successful extensions: 1211
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3374709644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)