Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I06
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0071 - 20675501-20675830,20676120-20676286,20676472-206766...    29   3.8  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.0  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    29   5.0  
07_01_0080 + 587674-588510                                             29   6.6  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   6.6  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   8.7  
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907...    28   8.7  

>09_06_0071 -
           20675501-20675830,20676120-20676286,20676472-20676619,
           20676768-20677205,20677667-20677741,20678000-20678283,
           20678940-20679159
          Length = 553

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 807 VGGGXXXXEKPXPXPXPPGTXEXK 736
           VGGG     KP P P PPG  + K
Sbjct: 34  VGGGSGRKLKPLPVPGPPGAIDSK 57


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +3

Query: 798 PXXXPPXXXGVXPFXXPPXPFPPPQXP 878
           P   PP   G  P   PP P PPP  P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPP 573


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +2

Query: 185 INTLAESAKKTIEELR--EKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 334
           ++   E A+K  E L+  +K   +L PE +K+ F +++ +F +F   L+P E
Sbjct: 254 VHATLEEARKFNEALQRWDKNAVSLVPEGLKRFFLSIMSNFRDFEDELEPHE 305


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +3

Query: 798 PXXXPPXXXGVXPFXXPPXPFPPPQXP 878
           P   PP   G  P   PP P PPP  P
Sbjct: 93  PPPPPPPSSGSPPPPPPPPPPPPPPPP 119


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = +3

Query: 810 PPXXXGVX-PFXXPPXPFPPPQXP 878
           PP   G+  PF  PP P PPP  P
Sbjct: 516 PPGFQGLAGPFYGPPYPAPPPPPP 539


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 167 PKEDNSINTLAESAKKTIEELREKVE 244
           PKE ++  T+A + +KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


>01_01_1145 +
           9073973-9074281,9075440-9075998,9076088-9076241,
           9077475-9077565,9077722-9077793,9077879-9078390,
           9078854-9078923,9079514-9079579,9080266-9080570,
           9080872-9081006,9081141-9081204,9081429-9081574,
           9081669-9081773,9082310-9082490
          Length = 922

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 536 PFGGGXXXPXXXKXPWXRWAPPP 604
           P GGG   P     PW +  PPP
Sbjct: 21  PAGGGGGGPGAPASPWRKTTPPP 43


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,131,927
Number of Sequences: 37544
Number of extensions: 379827
Number of successful extensions: 1398
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)