Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_I05
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0068 + 488943-490457                                             29   5.0  
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888...    28   8.7  

>02_01_0068 + 488943-490457
          Length = 504

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 248 LLDAS*KHPLATLFPGISKRTFLKLWQKHVA 340
           +L A    P+ + FP I+KR F   W  HVA
Sbjct: 214 MLRAFTSFPVFSFFPAITKRLFRNQWAAHVA 244


>04_02_0031 +
           8874025-8874180,8882152-8882550,8882651-8882987,
           8883234-8884060
          Length = 572

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 19/86 (22%), Positives = 39/86 (45%)
 Frame = -2

Query: 296 SPETASQGDVSKKHPIKAFRESIFPTKASISRSSFSELYVSLQ*TAANSAKHST*KPFIL 117
           SPE   Q +    H I     ++F  +A   R + S+   + +    N +   + +PFI+
Sbjct: 137 SPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEVNPSLPPSFEPFIM 196

Query: 116 NYSLQLIRKIILYSAHAELLNXEWQI 39
           N++++ + + ++   H  L   E  I
Sbjct: 197 NFNMKNLNRTLI-ELHGMLKTAEESI 221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,585,170
Number of Sequences: 37544
Number of extensions: 316115
Number of successful extensions: 795
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)