Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_I01
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 65 5e-11
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 31 0.79
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 31 0.79
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.2
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 3.2
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.4
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2
Query: 146 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 325
YLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+ KLSS+P
Sbjct: 7 YLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVP 66
Query: 326 VGG 334
GG
Sbjct: 67 SGG 69
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 65.3 bits (152), Expect = 5e-11
Identities = 41/106 (38%), Positives = 49/106 (46%)
Frame = +2
Query: 146 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 325
YLLAVLGG P D++ ILS+VG++AD E K V++ L GK VE+LIA G L S
Sbjct: 7 YLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVS-- 64
Query: 326 VGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 463
V GG MGFGLFD
Sbjct: 65 VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 173 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 292
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 173 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 292
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2
Query: 336 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 166
P P SRP+AI +TS S + + PS S P+ L +F+ + GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 588 PPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
PP P P G+PP G P P F PP P P NP
Sbjct: 161 PPSGGPPGLFDPSGAPPSGGPPGP-----FGPSGAPPSGGPPGPFNP 202
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 588 PPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
PP P P G+PP G P P F PP P P NP
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGP-----FDPSGAPPSGGPPGPFNP 262
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 588 PPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
PP P P G+PP G P P F PP P P NP
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGP-----FDPSGAPPSGGPPGPFNP 412
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 588 PPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
PP P P G+PP G P P F PP P P NP
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGP-----FNPSGAPPSGGPPGPFNP 427
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 588 PPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
PP P P G+PP G P P F PP P P NP
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGP-----FNPSGAPPSGGPPGPFNP 442
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 588 PPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
PP P P G+PP G P P F PP P P NP
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGP-----FNPSGAPPSGGPPGPFNP 457
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 588 PPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
PP P P G+PP G P P F PP P P NP
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGP-----FNPSGAPPSGGPPGPFNP 472
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 588 PPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
PP P P G+PP G P P F PP P P NP
Sbjct: 461 PPSGGPPGPFNPSGAPPSGGPPGP-----FDPSGAPPSGGPPGPFNP 502
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +3
Query: 561 PXXXPXXPXPPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPPHXQPTLPRNP 728
P P PP P P P G+P P G PH P P+NP
Sbjct: 589 PGMMPPGMMPPGMHPGMAGMPPMHPGMQGMP--PMHPGMQGMPGMPHGPPQPPQNP 642
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/99 (23%), Positives = 24/99 (24%), Gaps = 2/99 (2%)
Frame = +3
Query: 561 PXXXPXXPXPPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPP--HXQPTLPRNPXX 734
P P P P P P G P G P P G P QP P N
Sbjct: 129 PGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGSNGNPGSPGQDGQPGAPGNKGP 188
Query: 735 XXXQNXXIAXXXXXXXXXXXAXNPXXPXXPXPSPLXSPR 851
A P P P P P+
Sbjct: 189 SGQNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGAPGPQ 227
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/99 (23%), Positives = 24/99 (24%), Gaps = 2/99 (2%)
Frame = +3
Query: 561 PXXXPXXPXPPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPP--HXQPTLPRNPXX 734
P P P P P P G P G P P G P QP P N
Sbjct: 96 PGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGP 155
Query: 735 XXXQNXXIAXXXXXXXXXXXAXNPXXPXXPXPSPLXSPR 851
A P P P P P+
Sbjct: 156 SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGTPGPQ 194
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/99 (23%), Positives = 24/99 (24%), Gaps = 2/99 (2%)
Frame = +3
Query: 561 PXXXPXXPXPPXXXPXXXTXPXGSPPXXGLPXPPXXIXFXGXXXPP--HXQPTLPRNPXX 734
P P P P P P G P G P P G P QP P N
Sbjct: 129 PGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGP 188
Query: 735 XXXQNXXIAXXXXXXXXXXXAXNPXXPXXPXPSPLXSPR 851
A P P P P P+
Sbjct: 189 SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGTPGPQ 227
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +3
Query: 573 PXXPXPPXXXPXXXTXPXGSPPXXGLP----XPPXXIXFXGXXXPPHXQP 710
P P PP P P PP GLP PP G PP P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +3
Query: 573 PXXPXPPXXXPXXXTXPXGSPPXXGLP----XPPXXIXFXGXXXPPHXQP 710
P P PP P P PP GLP PP G PP P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +3
Query: 573 PXXPXPPXXXPXXXTXPXGSPPXXGLP----XPPXXIXFXGXXXPPHXQP 710
P P PP P P PP GLP PP G PP P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,703,554
Number of Sequences: 27780
Number of extensions: 223815
Number of successful extensions: 884
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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