Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H24
         (939 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    27   0.21 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = +2

Query: 695 PXXPPXPXPQXXSPT-PPXXYXXSXXPPXPXPPXTSPPPXPXPPPXLXNP 841
           P   P P      P  PP  +  +  PP P  P    P  P  PP + NP
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPL--PLPPIFPPTMINP 196



 Score = 23.8 bits (49), Expect = 2.0
 Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
 Frame = +1

Query: 742 PXPXLXLXXP--PPTXXPSXFPPPXPXSPPXPXKP 840
           P P +    P  PPT       PP P  PP P  P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPP 187



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 686 PSXPXXPPXPXPQXXSPT 739
           P  P  PP P P    PT
Sbjct: 175 PPLPQVPPLPLPPIFPPT 192


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/46 (30%), Positives = 15/46 (32%)
 Frame = +2

Query: 644 TXPPPXPGXPXLPRPSXPXXPPXPXPQXXSPTPPXXYXXSXXPPXP 781
           T P P P  P  P P+ P   P       S T          PP P
Sbjct: 78  TSPEPDPEIPVAPEPA-PLASPLVQEPGSSTTSATSGAVMASPPMP 122


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 644  TXPPPXPGXPXLPRPSXPXXP 706
            T PPP    P + +PS P  P
Sbjct: 1085 TIPPPAVVMPEVDKPSQPCEP 1105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,403
Number of Sequences: 336
Number of extensions: 2763
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26375415
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)