Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H23
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical...    57   2e-08
U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like pr...    31   0.80 
Z81063-1|CAB02952.1|  376|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical
           protein Y54G2A.23 protein.
          Length = 168

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
 Frame = +3

Query: 402 IVKPLSWSMPADKIC-EKLKKKDAPICDLRXDKQ-SI*IMLIGKTKVRDLKKIL-TTGMX 572
           + KPLSWSMP +K+C EKLK KDA IC+L+ DK      + + K +V++LK IL   G  
Sbjct: 83  VTKPLSWSMPTEKVCLEKLKGKDAQICELKYDKPLDWKTIDLKKMRVKELKNILGEWGEV 142

Query: 573 XAMXPPKN*LL*XIKKLKP 629
                 K  L+  I++LKP
Sbjct: 143 CKGCTEKAELIKRIEELKP 161



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 16/28 (57%), Positives = 23/28 (82%)
 Frame = +1

Query: 331 KNKENRFCYYLGGLEESATGILGELSSP 414
           +NKEN+FC+Y+G L ESAT I+ E++ P
Sbjct: 59  RNKENKFCFYIGALPESATSIMNEVTKP 86



 Score = 33.9 bits (74), Expect = 0.15
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 167 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSRTKKI 346
           L+ L + V VV S     CEVC K ++   A +    K  P  I    ++ C+ +R K+ 
Sbjct: 4   LVLLISLVIVVASAAAPQCEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRNKEN 63

Query: 347 DF 352
            F
Sbjct: 64  KF 65


>U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like
           protein family protein4 protein.
          Length = 103

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 167 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKK 316
           L+F+ATAV +        C++C   V+K+  ++  DV    K  + E KK
Sbjct: 10  LVFVATAVVLPHQRNSLGCQMCELAVKKYDGSVDKDVNGIKKDFDTECKK 59


>Z81063-1|CAB02952.1|  376|Caenorhabditis elegans Hypothetical
           protein F15D3.2 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 176 LATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEF 310
           L+ A Q+    +E   E   K V  FA+T  DD   DPK + A F
Sbjct: 120 LSGAEQLFKQDKEHSREHYRKVVIVFASTYKDDGANDPKPVAARF 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,788,888
Number of Sequences: 27780
Number of extensions: 300096
Number of successful extensions: 690
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)