Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H20
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123158-1|BAC85544.1|  572|Homo sapiens protein ( Homo sapiens ...    33   1.3  
AL121674-3|CAI21745.1|  373|Homo sapiens chromodomain helicase D...    30   9.4  
AL121674-2|CAI21744.1| 2715|Homo sapiens chromodomain helicase D...    30   9.4  
AL121674-1|CAI21743.1|  149|Homo sapiens chromodomain helicase D...    30   9.4  
AL031669-4|CAI22256.1|  373|Homo sapiens chromodomain helicase D...    30   9.4  
AL031669-3|CAI22255.1| 2715|Homo sapiens chromodomain helicase D...    30   9.4  
AL031669-2|CAI22254.1|  149|Homo sapiens chromodomain helicase D...    30   9.4  
AL031667-6|CAI42981.1|  373|Homo sapiens chromodomain helicase D...    30   9.4  
AL031667-2|CAI42977.1| 2715|Homo sapiens chromodomain helicase D...    30   9.4  

>AK123158-1|BAC85544.1|  572|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41163 fis, clone BRACE2039734. ).
          Length = 572

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 636 RKKYGRRKTRSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +KK   +  + PK  +  ++KK E + PK PK  +  K PKE+K
Sbjct: 398 KKKKRSKAKKDPKEPKEPKEKK-EPKEPKTPKAPKIPKEPKEKK 440


>AL121674-3|CAI21745.1|  373|Homo sapiens chromodomain helicase DNA
           binding protein 6 protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 663 RSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +  K+  P  K+K E + PK+P++ +  K  KE K
Sbjct: 144 KGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHK 178


>AL121674-2|CAI21744.1| 2715|Homo sapiens chromodomain helicase DNA
           binding protein 6 protein.
          Length = 2715

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 663 RSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +  K+  P  K+K E + PK+P++ +  K  KE K
Sbjct: 109 KGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHK 143


>AL121674-1|CAI21743.1|  149|Homo sapiens chromodomain helicase DNA
           binding protein 6 protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 663 RSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +  K+  P  K+K E + PK+P++ +  K  KE K
Sbjct: 109 KGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHK 143


>AL031669-4|CAI22256.1|  373|Homo sapiens chromodomain helicase DNA
           binding protein 6 protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 663 RSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +  K+  P  K+K E + PK+P++ +  K  KE K
Sbjct: 144 KGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHK 178


>AL031669-3|CAI22255.1| 2715|Homo sapiens chromodomain helicase DNA
           binding protein 6 protein.
          Length = 2715

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 663 RSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +  K+  P  K+K E + PK+P++ +  K  KE K
Sbjct: 109 KGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHK 143


>AL031669-2|CAI22254.1|  149|Homo sapiens chromodomain helicase DNA
           binding protein 6 protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 663 RSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +  K+  P  K+K E + PK+P++ +  K  KE K
Sbjct: 109 KGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHK 143


>AL031667-6|CAI42981.1|  373|Homo sapiens chromodomain helicase DNA
           binding protein 6 protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 663 RSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +  K+  P  K+K E + PK+P++ +  K  KE K
Sbjct: 144 KGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHK 178


>AL031667-2|CAI42977.1| 2715|Homo sapiens chromodomain helicase DNA
           binding protein 6 protein.
          Length = 2715

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 663 RSPKNXRPXEKKKLEXR*PKDPKRXRAXKXPKERK 767
           +  K+  P  K+K E + PK+P++ +  K  KE K
Sbjct: 109 KGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHK 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,916,422
Number of Sequences: 237096
Number of extensions: 833507
Number of successful extensions: 1590
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)