Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_H16
(898 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 31 1.2
11_06_0610 - 25449085-25453284 30 2.2
09_03_0145 - 12749288-12751510 30 2.2
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.2
11_01_0385 + 2915532-2916482 29 3.8
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 3.8
05_01_0142 - 940421-940701,941262-941574 29 5.0
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 6.6
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 6.6
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 8.8
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698... 28 8.8
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 28 8.8
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 8.8
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956 25 10.0
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +1
Query: 613 FPXXPXXPPXPXXXXPPPXXXXXSXGXXGSPPLRGGVNXG--PXTLKTXPXXXFXPHPPP 786
FP P PP P PPP G P +R G+ G P P F P PP
Sbjct: 197 FPGGPPPPPGPFMRGPPP---------MGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPP 247
Query: 787 XXP 795
P
Sbjct: 248 PPP 250
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 616 PXXPXXPPXPXXXXPPPXXXXXSXGXXGSPPLRGGVNXGPXTLKTXPXXXFXPHPPP 786
P PP P PPP SPP V P +K+ P PPP
Sbjct: 1219 PAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAAPVILSPPAVKSLPPPAPVSLPPP 1275
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 616 PXXPXXPPXPXXXXPPPXXXXXSXGXXGSPPLRGGVNXGPXTLKTXPXXXFXPHPPP 786
P PP P PPP SPP V P +K+ P PPP
Sbjct: 1155 PAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPP 1211
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 616 PXXPXXPPXPXXXXPPPXXXXXSXGXXGSPPLRGGVNXGPXTLKTXPXXXFXPHPPP 786
P PP P PPP SPP V P +K+ P PPP
Sbjct: 1187 PAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPP 1243
>09_03_0145 - 12749288-12751510
Length = 740
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 618 PXXXPPXPPXXXXPPPXXXXXXPGXXGIPPFKG 716
P PP PP PPP P PPF G
Sbjct: 28 PSPPPPPPPPGIQPPPPALPGMPHGRPPPPFPG 60
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 615 PPXXXPPXPPXXXXPPPXXXXXXPGXXGIPPFKGR 719
PP PP PP PPP P PP G+
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGK 373
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 625 PXXPPXPXXXXPPPXXXXXSXGXXGSPPLRGGVNXGPXTLKTXPXXXFXPHPPPXXP 795
P PP P PPP + PP +G P P P PPP P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPP--PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
>11_01_0385 + 2915532-2916482
Length = 316
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +3
Query: 615 PPXXXPPXPPXXXXPPPXXXXXXPG--XXGIPPFKG 716
P PP PP PPP PG +PPF G
Sbjct: 264 PGNQWPPLPPFPFHPPPMPAWPHPGNQWPPLPPFHG 299
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +1
Query: 616 PXXPXXPPXPXXXXPPPXXXXXSXGXXGSP-PLRGGVNXGPXTLKTXPXXXFXPHPPPXX 792
P PP P PPP + G G P P GP + P P PPP
Sbjct: 221 PSAASLPPLPPPPPPPPKPANIA-GAPGLPLPPPPPPPPGPPPREIVPGQTLLPPPPPPR 279
Query: 793 P 795
P
Sbjct: 280 P 280
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 612 FPPXXXPPXPPXXXXPPPXXXXXXPGXXGIPP 707
+PP PP PP PPP PG PP
Sbjct: 35 YPPQGYPP-PPGAYPPPPGAYPPPPGAYPPPP 65
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 615 PPXXXPPXPPXXXXPPPXXXXXXPGXXGIPP 707
PP PP PP PPP P PP
Sbjct: 426 PPPPLPPPPPPPPPPPPPLPPNMPPPLPPPP 456
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 615 PPXXXPPXPPXXXXPPPXXXXXXPGXXGIPP 707
PP PP P PPP PG PP
Sbjct: 586 PPEPSPPPAPKAAPPPPPPKSTGPGPPRPPP 616
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 597 NKSYIFPPXXXPPXPPXXXXPPPXXXXXXPGXXGIPP 707
NK PP PP PP PP P PP
Sbjct: 317 NKQMASPPSNPPPAPPPPPPPPSRFNNTTPKPPPPPP 353
>07_03_1727 +
29068348-29068571,29069473-29069514,29069593-29069839,
29069936-29070013,29070551-29070736,29070829-29071126,
29071775-29072244
Length = 514
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 169 RRGQRCSRAQVEALQEN*ESGTQRSRWINQSGSSYSRHRA 288
+RG++ +RA+ EA +E GT+R+R + + + HRA
Sbjct: 384 KRGEQMARAR-EAAREITPEGTERARVVGEEEAGPEHHRA 422
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 616 PXXPXXPPXPXXXXPPPXXXXXSXGXXGSPPLRGGVNXG 732
P P PP P PPP S G GS G + G
Sbjct: 50 PRPPPPPPPPTQPAPPPPPPARSGGGGGSDDGSDGDDEG 88
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 615 PPXXXPPXPPXXXXPPPXXXXXXPGXXGIPP 707
PP PP PP PP P G PP
Sbjct: 356 PPPPPPPPPPPPPPPPRPPPPPPPIKKGAPP 386
>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
Length = 397
Score = 24.6 bits (51), Expect(2) = 10.0
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 480 YHSHXLHQSDPVHMCRNI 533
YH H HQ H C N+
Sbjct: 333 YHHHHHHQGGQAHPCANL 350
Score = 21.8 bits (44), Expect(2) = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 630 PPXPPXXXXPPP 665
PP PP PPP
Sbjct: 355 PPPPPPPPPPPP 366
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,774,135
Number of Sequences: 37544
Number of extensions: 345406
Number of successful extensions: 2036
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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