Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_H14
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical pr... 105 6e-23
Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical pr... 99 5e-21
AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical ... 31 1.1
U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 28 7.7
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 28 7.7
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 28 7.7
>Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical
protein W01D2.1 protein.
Length = 92
Score = 105 bits (251), Expect = 6e-23
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +2
Query: 74 EGYSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 253
+G +FGK+ K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W K+
Sbjct: 3 KGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTG 62
Query: 254 XMRHLKIVRRRFRNGFKEGKPTPPK 328
RHL+ V RFRNGF+EG P+
Sbjct: 63 RTRHLRDVNARFRNGFREGTTPKPR 87
>Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical
protein C54C6.1 protein.
Length = 91
Score = 98.7 bits (235), Expect = 5e-21
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +2
Query: 74 EGYSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 253
+G +FGK+ K+HTLC+RCG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 3 KGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTG 62
Query: 254 XMRHLKIVRRRFRNGFKEGKPTP 322
RHL+ V RFRNGF+ P P
Sbjct: 63 RTRHLRDVNARFRNGFRGTTPKP 85
>AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical
protein C36C9.4 protein.
Length = 671
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 86 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 193
++ K TH C +CG+ + + KC CG P A
Sbjct: 93 TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126
>U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical
protein T25D1.2 protein.
Length = 438
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 86 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 193
++ K TH C +CG+ + + KC CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 27 EFLKICFRIVKSDK-MTKGTQASVSAEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQ 194
E + ++K K +++ + A+++ I+Y D +++H + F+NQ + L+
Sbjct: 205 ESFNVILGLLKDMKELSENKDHYLPADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEI 264
Query: 195 NYDP 206
N DP
Sbjct: 265 NADP 268
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 51 IVKSDKMTKGTQASVSAEIRPIRYAEDVVDRHITFKNQNAPNVDILQQNYD 203
I D+M K + A ++Y+EDV + ++ Q ++ QQNY+
Sbjct: 3475 ICLKDQMFKDFSEQMDATFNEMQYSEDVTMMTLRWRKQLEEDLVYFQQNYN 3525
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 51 IVKSDKMTKGTQASVSAEIRPIRYAEDVVDRHITFKNQNAPNVDILQQNYD 203
I D+M K + A ++Y+EDV + ++ Q ++ QQNY+
Sbjct: 3486 ICLKDQMFKDFSEQMDATFNEMQYSEDVTMMTLRWRKQLEEDLVYFQQNYN 3536
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 51 IVKSDKMTKGTQASVSAEIRPIRYAEDVVDRHITFKNQNAPNVDILQQNYD 203
I D+M K + A ++Y+EDV + ++ Q ++ QQNY+
Sbjct: 3486 ICLKDQMFKDFSEQMDATFNEMQYSEDVTMMTLRWRKQLEEDLVYFQQNYN 3536
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 51 IVKSDKMTKGTQASVSAEIRPIRYAEDVVDRHITFKNQNAPNVDILQQNYD 203
I D+M K + A ++Y+EDV + ++ Q ++ QQNY+
Sbjct: 3486 ICLKDQMFKDFSEQMDATFNEMQYSEDVTMMTLRWRKQLEEDLVYFQQNYN 3536
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,317,740
Number of Sequences: 27780
Number of extensions: 249069
Number of successful extensions: 375
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -