Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H13
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1460 + 33764106-33764303,33764675-33766201                       29   3.5  
09_03_0052 + 11904633-11905616,11906324-11906491,11906588-11906977     29   4.7  

>04_04_1460 + 33764106-33764303,33764675-33766201
          Length = 574

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 240 CPDVLRQRGTCARP*GISR 184
           C DV RQ GTCA P G+ R
Sbjct: 85  CSDVARQAGTCAGPSGLHR 103


>09_03_0052 + 11904633-11905616,11906324-11906491,11906588-11906977
          Length = 513

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/58 (31%), Positives = 22/58 (37%)
 Frame = -3

Query: 462 HFRHHVGEASEVAAEHQAVDRTLVVAVSPQLVEPGNASASALAEYCAPNFANGYVRVV 289
           H   H G      AE    D   V AV P+L  P  A +  L    A +F   + R V
Sbjct: 84  HSLRHYGVVKRPEAEPLLPDFDFVAAVGPRLASPSGARSLVLLLADASDFDGSFPRAV 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,059,731
Number of Sequences: 37544
Number of extensions: 366836
Number of successful extensions: 1482
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)