Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H13
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077540-5|AAC26308.1|  417|Caenorhabditis elegans C-type lectin...    32   0.45 
U00048-7|AAB53831.2|  752|Caenorhabditis elegans Hypothetical pr...    31   0.78 
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical...    30   1.8  
AC024840-2|AAX55682.1|  434|Caenorhabditis elegans Hypothetical ...    28   9.6  
AC024840-1|AAF59619.2|  427|Caenorhabditis elegans Hypothetical ...    28   9.6  

>AF077540-5|AAC26308.1|  417|Caenorhabditis elegans C-type lectin
           protein 20 protein.
          Length = 417

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 295 PYVAVSEIRSTVFCESACGSIPWLHELRRNRNY 393
           P+VA S IR+   CE  CGS+  +H    NR +
Sbjct: 165 PHVASSFIRAQRTCEEECGSLVSIHSANENRYF 197


>U00048-7|AAB53831.2|  752|Caenorhabditis elegans Hypothetical
           protein C05D11.9 protein.
          Length = 752

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 68  RSLHQDVAKFLQSMRSQAEVHLXQRHARGAGLEDGAPAHRDIPQGRAQVPRCLSTSGQW 244
           R++  D+ +F ++MR  A  HL  +HA+         A R     R +  R  ST G W
Sbjct: 51  RAMAYDIRRFPRTMREFAAAHLISKHAKKC---PSRFARRKSANSRTKFGRSTSTKGIW 106


>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
           protein Y53F4B.21 protein.
          Length = 1099

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = -3

Query: 333 EYCAPNFANGYVRVVQNDDRRRGLVLLDVD 244
           E  APN A  Y R+ Q   R+ GLVLLD D
Sbjct: 712 EILAPNNAKVYTRMQQIAKRKYGLVLLDPD 741


>AC024840-2|AAX55682.1|  434|Caenorhabditis elegans Hypothetical
           protein Y59H11AL.1b protein.
          Length = 434

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +1

Query: 232 IWTVVHVKEHKTATAIVVLNDPYVAVSEIRSTVFC 336
           I  +V+ K  +TAT I++LN   +AV+++  +VFC
Sbjct: 72  ILVIVYFKRLRTATNILILN---LAVADLLISVFC 103


>AC024840-1|AAF59619.2|  427|Caenorhabditis elegans Hypothetical
           protein Y59H11AL.1a protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +1

Query: 232 IWTVVHVKEHKTATAIVVLNDPYVAVSEIRSTVFC 336
           I  +V+ K  +TAT I++LN   +AV+++  +VFC
Sbjct: 72  ILVIVYFKRLRTATNILILN---LAVADLLISVFC 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,997,431
Number of Sequences: 27780
Number of extensions: 262999
Number of successful extensions: 844
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)