Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H12
         (949 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032324-1|AAH32324.1|  336|Homo sapiens 3-hydroxyisobutyrate de...    54   6e-07
AF529362-1|AAQ09596.1|  336|Homo sapiens NS5ATP1 protein.              54   6e-07
AB050000-1|BAF42045.1|  336|Homo sapiens 3'-hydroxyisobutyrate d...    54   6e-07
BC110336-1|AAI10337.1|  307|Homo sapiens TTMB protein protein.         32   3.5  
BC082989-1|AAH82989.1|  307|Homo sapiens TTMB protein protein.         32   3.5  
BC064538-1|AAH64538.1|  306|Homo sapiens TTMB protein protein.         32   3.5  
BC064375-1|AAH64375.2|  307|Homo sapiens TTMB protein protein.         32   3.5  

>BC032324-1|AAH32324.1|  336|Homo sapiens 3-hydroxyisobutyrate
           dehydrogenase protein.
          Length = 336

 Score = 54.4 bits (125), Expect = 6e-07
 Identities = 33/97 (34%), Positives = 48/97 (49%)
 Frame = +2

Query: 200 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 379
           LGNMG  MA NL+K G+ +  YD   DA       G    +S            ++L ++
Sbjct: 47  LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTS 106

Query: 380 KVXLDXYLGKDGVVAHAKKXSLLIXPSXIDPNVPKQI 490
              ++ Y G +G++   KK SLLI  S IDP V K++
Sbjct: 107 INAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKEL 143


>AF529362-1|AAQ09596.1|  336|Homo sapiens NS5ATP1 protein.
          Length = 336

 Score = 54.4 bits (125), Expect = 6e-07
 Identities = 33/97 (34%), Positives = 48/97 (49%)
 Frame = +2

Query: 200 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 379
           LGNMG  MA NL+K G+ +  YD   DA       G    +S            ++L ++
Sbjct: 47  LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTS 106

Query: 380 KVXLDXYLGKDGVVAHAKKXSLLIXPSXIDPNVPKQI 490
              ++ Y G +G++   KK SLLI  S IDP V K++
Sbjct: 107 INAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKEL 143


>AB050000-1|BAF42045.1|  336|Homo sapiens 3'-hydroxyisobutyrate
           dehydrogenase protein.
          Length = 336

 Score = 54.4 bits (125), Expect = 6e-07
 Identities = 33/97 (34%), Positives = 48/97 (49%)
 Frame = +2

Query: 200 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 379
           LGNMG  MA NL+K G+ +  YD   DA       G    +S            ++L ++
Sbjct: 47  LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTS 106

Query: 380 KVXLDXYLGKDGVVAHAKKXSLLIXPSXIDPNVPKQI 490
              ++ Y G +G++   KK SLLI  S IDP V K++
Sbjct: 107 INAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKEL 143


>BC110336-1|AAI10337.1|  307|Homo sapiens TTMB protein protein.
          Length = 307

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -2

Query: 261 PRTVKPFLTKFAAMNPPMFPRAEESHILVGVRTIRPSGGCVQ 136
           P  +  +  K   + PP  PR +  H+++   T++PSG C++
Sbjct: 218 PALLNSYPLKGPGLPPPWGPRTQTGHVII---TVQPSGSCIE 256


>BC082989-1|AAH82989.1|  307|Homo sapiens TTMB protein protein.
          Length = 307

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -2

Query: 261 PRTVKPFLTKFAAMNPPMFPRAEESHILVGVRTIRPSGGCVQ 136
           P  +  +  K   + PP  PR +  H+++   T++PSG C++
Sbjct: 218 PALLNSYPLKGPGLPPPWGPRTQTGHVII---TVQPSGSCIE 256


>BC064538-1|AAH64538.1|  306|Homo sapiens TTMB protein protein.
          Length = 306

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -2

Query: 261 PRTVKPFLTKFAAMNPPMFPRAEESHILVGVRTIRPSGGCVQ 136
           P  +  +  K   + PP  PR +  H+++   T++PSG C++
Sbjct: 217 PALLNSYPLKGPGLPPPWGPRTQTGHVII---TVQPSGSCIE 255


>BC064375-1|AAH64375.2|  307|Homo sapiens TTMB protein protein.
          Length = 307

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -2

Query: 261 PRTVKPFLTKFAAMNPPMFPRAEESHILVGVRTIRPSGGCVQ 136
           P  +  +  K   + PP  PR +  H+++   T++PSG C++
Sbjct: 218 PALLNSYPLKGPGLPPPWGPRTQTGHVII---TVQPSGSCIE 256


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,784,824
Number of Sequences: 237096
Number of extensions: 2939050
Number of successful extensions: 10876
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10567
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)