Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H12
         (949 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-8|CAB03798.1|  299|Caenorhabditis elegans Hypothetical pr...    40   0.003
AL031630-23|CAA21003.1|  299|Caenorhabditis elegans Hypothetical...    40   0.003
Z99281-40|CAB16512.1|  268|Caenorhabditis elegans Hypothetical p...    31   1.6  
AF067940-4|AAC19201.1|  487|Caenorhabditis elegans Hypothetical ...    29   4.9  

>Z81453-8|CAB03798.1|  299|Caenorhabditis elegans Hypothetical
           protein B0250.5 protein.
          Length = 299

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 27/97 (27%), Positives = 41/97 (42%)
 Frame = +2

Query: 200 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 379
           LGNMGG MA NL+K G  +  YD +K  +      G   A              ++L S+
Sbjct: 9   LGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVLPSS 68

Query: 380 KVXLDXYLGKDGVVAHAKKXSLLIXPSXIDPNVPKQI 490
                 Y G+ G+    +  +L +  S ID  V  ++
Sbjct: 69  PHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEV 105


>AL031630-23|CAA21003.1|  299|Caenorhabditis elegans Hypothetical
           protein B0250.5 protein.
          Length = 299

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 27/97 (27%), Positives = 41/97 (42%)
 Frame = +2

Query: 200 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 379
           LGNMGG MA NL+K G  +  YD +K  +      G   A              ++L S+
Sbjct: 9   LGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVLPSS 68

Query: 380 KVXLDXYLGKDGVVAHAKKXSLLIXPSXIDPNVPKQI 490
                 Y G+ G+    +  +L +  S ID  V  ++
Sbjct: 69  PHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEV 105


>Z99281-40|CAB16512.1|  268|Caenorhabditis elegans Hypothetical
           protein Y57G11C.11a protein.
          Length = 268

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 200 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAA 295
           +G+ GG ++  L + GF V G D +K A+ AA
Sbjct: 82  VGSGGGLLSIPLARSGFDVTGIDATKQAVEAA 113


>AF067940-4|AAC19201.1|  487|Caenorhabditis elegans Hypothetical
           protein F36F12.2 protein.
          Length = 487

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 27  NS*DLPVALRPRTRPHAKLRKKQIQNGRAHNIKHSVFVHS 146
           NS D P+ L  + R     + K I N    ++KH VFV+S
Sbjct: 317 NSDDRPIYLTKKQRKPIYRKMKYIYNNGIFHLKHMVFVNS 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,980,443
Number of Sequences: 27780
Number of extensions: 385154
Number of successful extensions: 1047
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)