Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_H11
(1035 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 43 4e-04
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.19
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.19
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.19
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.25
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.33
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.44
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.44
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.44
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.0
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 26 2.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.4
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.4
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.4
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 2.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 2.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 3.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.1
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 25 3.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 25 3.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 5.4
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 5.4
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 5.4
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 5.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.4
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 7.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 7.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 24 7.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 9.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.5
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 9.5
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 28 9.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 9.5
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 9.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 9.5
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 42.7 bits (96), Expect = 4e-04
Identities = 34/111 (30%), Positives = 35/111 (31%), Gaps = 1/111 (0%)
Frame = -1
Query: 687 GGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXXAXPX 508
GGG P GGGGG + GGR G A
Sbjct: 323 GGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNA--- 379
Query: 507 GGGGGGXXXXKKTP-XXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKG 358
GGGGGG P P P P G GGGG GG GG G
Sbjct: 380 GGGGGGAPQAAPAPQAAPAPAAPAG--GGYNAGGGGGAGGGGGYAGGAGAG 428
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.19
Identities = 26/81 (32%), Positives = 28/81 (34%)
Frame = +1
Query: 271 GGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPGXX 450
G PPPPP PP GG PP++ PPPP P
Sbjct: 725 GPPPPPPPGGLPP------ITGGPPPPPPPGGLPPISG--GPPPPPPPPGGCPPPPPPPP 776
Query: 451 GGGXXXGFFXXXXXPPPPPXG 513
GG G PPPPP G
Sbjct: 777 PGGFKGG------PPPPPPPG 791
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/83 (31%), Positives = 27/83 (32%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP P GG PP+T PPPP S G
Sbjct: 708 PITGGPPPPPGLPP-------ITGGPPPPPPPGGLPPITG---GPPPPPPPGGLPPISGG 757
Query: 445 XXGGGXXXGFFXXXXXPPPPPXG 513
G PPPPP G
Sbjct: 758 PPPPPPPPG--GCPPPPPPPPPG 778
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
P GG PP GG PP GG PP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPP 408
P GG PPPPP P G F GG F P+ PP
Sbjct: 764 PPGGCPPPPPPPPP-----GGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
G P G PP GG PP GG PP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.19
Identities = 26/81 (32%), Positives = 28/81 (34%)
Frame = +1
Query: 271 GGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPGXX 450
G PPPPP PP GG PP++ PPPP P
Sbjct: 725 GPPPPPPPGGLPP------ITGGPPPPPPPGGLPPISG--GPPPPPPPPGGCPPPPPPPP 776
Query: 451 GGGXXXGFFXXXXXPPPPPXG 513
GG G PPPPP G
Sbjct: 777 PGGFKGG------PPPPPPPG 791
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/83 (31%), Positives = 27/83 (32%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP P GG PP+T PPPP S G
Sbjct: 708 PITGGPPPPPGLPP-------ITGGPPPPPPPGGLPPITG---GPPPPPPPGGLPPISGG 757
Query: 445 XXGGGXXXGFFXXXXXPPPPPXG 513
G PPPPP G
Sbjct: 758 PPPPPPPPG--GCPPPPPPPPPG 778
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
P GG PP GG PP GG PP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPP 408
P GG PPPPP P G F GG F P+ PP
Sbjct: 764 PPGGCPPPPPPPPP-----GGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
G P G PP GG PP GG PP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.19
Identities = 26/81 (32%), Positives = 28/81 (34%)
Frame = +1
Query: 271 GGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPGXX 450
G PPPPP PP GG PP++ PPPP P
Sbjct: 308 GPPPPPPPGGLPP------ITGGPPPPPPPGGLPPISG--GPPPPPPPPGGCPPPPPPPP 359
Query: 451 GGGXXXGFFXXXXXPPPPPXG 513
GG G PPPPP G
Sbjct: 360 PGGFKGG------PPPPPPPG 374
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/83 (31%), Positives = 27/83 (32%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP P GG PP+T PPPP S G
Sbjct: 291 PITGGPPPPPGLPP-------ITGGPPPPPPPGGLPPITG---GPPPPPPPGGLPPISGG 340
Query: 445 XXGGGXXXGFFXXXXXPPPPPXG 513
G PPPPP G
Sbjct: 341 PPPPPPPPG--GCPPPPPPPPPG 361
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
P GG PP GG PP GG PP P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPP 408
P GG PPPPP P G F GG F P+ PP
Sbjct: 347 PPGGCPPPPPPPPP-----GGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
G P G PP GG PP GG PP P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.25
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPX--GPRGKKXXRKXGGGGXRXXXGGCEGG 370
G GGGG P PPP G G GGGG GGC GG
Sbjct: 41 GCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGG 88
Score = 30.7 bits (66), Expect = 1.8
Identities = 34/126 (26%), Positives = 34/126 (26%), Gaps = 12/126 (9%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXX 520
G GGG GGGGG GG G PP P
Sbjct: 25 GGGGGGGCGGGCGGGGGCG--GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 519 AXPXG------------GGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCE 376
G GGGGG P PP G GGG GGC
Sbjct: 83 GGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCG 142
Query: 375 GGEXKG 358
GG G
Sbjct: 143 GGGGGG 148
Score = 29.9 bits (64), Expect = 3.1
Identities = 33/114 (28%), Positives = 33/114 (28%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXX 520
G GGG GGGGG GG GG P P
Sbjct: 82 GGGCGGGGGGCGGGGGGCG---GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGG 138
Query: 519 AXPXGGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKG 358
GGGGGG G G GGGG GGC GG G
Sbjct: 139 GGCGGGGGGGCGGGGG--GCGGGGGGCGGGGGGCGGGGG-----GGCGGGGGGG 185
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.25
Identities = 28/112 (25%), Positives = 28/112 (25%), Gaps = 1/112 (0%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXXAXP 511
P GG GGGG GG GG
Sbjct: 227 PSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGY 286
Query: 510 XGG-GGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKG 358
G GGGG P PPP P GGG GG G G
Sbjct: 287 AGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSG 338
Score = 32.3 bits (70), Expect = 0.58
Identities = 29/107 (27%), Positives = 29/107 (27%), Gaps = 1/107 (0%)
Frame = -1
Query: 687 GGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXXAXPX 508
GGG GGGGG GG GG P
Sbjct: 148 GGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPS 207
Query: 507 GGGG-GGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGG 370
GGGG GG P G G GGG GG GG
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSG--GGGYATSGGGGSGGYATGGSSGG 252
Score = 31.9 bits (69), Expect = 0.77
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPR-GKKXXRKXGGGGXRXXXGGCEGG 370
GGGGGG P P G G GGGG GGC GG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 30.3 bits (65), Expect = 2.4
Identities = 34/124 (27%), Positives = 34/124 (27%), Gaps = 10/124 (8%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPP---------XXGGRXXGGXPPAPXXXXXXXXXXXXXXXX 547
G GGG GGGGG PP GG GG AP
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGC 90
Query: 546 XXXXXXXXXAXPXGGGGGG-XXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGG 370
GGGGGG G G GGG GGC GG
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Query: 369 EXKG 358
G
Sbjct: 151 SSGG 154
Score = 28.7 bits (61), Expect = 7.2
Identities = 32/128 (25%), Positives = 34/128 (26%), Gaps = 6/128 (4%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXX 520
G GGG GGGGG G GG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 519 AXPXGGGGGGXXXXKKT---PXXPPPXGPRGKKXXRKXGGGGXR---XXXGGCEGGEXKG 358
GGGGGG + P G G GGGG GGC GG G
Sbjct: 160 GGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSG 219
Query: 357 XXAPXXSP 334
+P
Sbjct: 220 GGGYASAP 227
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.25
Identities = 28/112 (25%), Positives = 28/112 (25%), Gaps = 1/112 (0%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXXAXP 511
P GG GGGG GG GG
Sbjct: 227 PSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGY 286
Query: 510 XGG-GGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKG 358
G GGGG P PPP P GGG GG G G
Sbjct: 287 AGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSG 338
Score = 32.3 bits (70), Expect = 0.58
Identities = 29/107 (27%), Positives = 29/107 (27%), Gaps = 1/107 (0%)
Frame = -1
Query: 687 GGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXXAXPX 508
GGG GGGGG GG GG P
Sbjct: 148 GGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPS 207
Query: 507 GGGG-GGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGG 370
GGGG GG P G G GGG GG GG
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSG--GGGYATSGGGGSGGYATGGSSGG 252
Score = 31.9 bits (69), Expect = 0.77
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPR-GKKXXRKXGGGGXRXXXGGCEGG 370
GGGGGG P P G G GGGG GGC GG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 30.3 bits (65), Expect = 2.4
Identities = 34/124 (27%), Positives = 34/124 (27%), Gaps = 10/124 (8%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPP---------XXGGRXXGGXPPAPXXXXXXXXXXXXXXXX 547
G GGG GGGGG PP GG GG AP
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGC 90
Query: 546 XXXXXXXXXAXPXGGGGGG-XXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGG 370
GGGGGG G G GGG GGC GG
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Query: 369 EXKG 358
G
Sbjct: 151 SSGG 154
Score = 28.7 bits (61), Expect = 7.2
Identities = 32/128 (25%), Positives = 34/128 (26%), Gaps = 6/128 (4%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXX 520
G GGG GGGGG G GG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 519 AXPXGGGGGGXXXXKKT---PXXPPPXGPRGKKXXRKXGGGGXR---XXXGGCEGGEXKG 358
GGGGGG + P G G GGGG GGC GG G
Sbjct: 160 GGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSG 219
Query: 357 XXAPXXSP 334
+P
Sbjct: 220 GGGYASAP 227
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.33
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPP 601
PGG PP GG G PP G G PP
Sbjct: 430 PGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPP 601
PG PP GG GG PP GG G PP
Sbjct: 420 PGSYGPPQ-GGPGGFGPPPPGGPGAYGPPP 448
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/80 (28%), Positives = 26/80 (32%)
Frame = +1
Query: 274 GXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPGXXG 453
G PPP P +G F PP + P PPP F +P G
Sbjct: 349 GAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFG----APQGPG 404
Query: 454 GGXXXGFFXXXXXPPPPPXG 513
G G PPPP G
Sbjct: 405 GPGGYG--------PPPPGG 416
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +3
Query: 588 PPXGRGGXXXXXXXXXX-GGFXPPPPXKXG--GXPPRXXPLXG 707
PP G G GGF PPPP G G PP P G
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
Score = 28.3 bits (60), Expect = 9.5
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPP---PPXFSXXFF 435
P G PPPP PG +G GG G F PP P PP PP +
Sbjct: 406 PGGYGPPPPGGPGAPG-SYGPPQGGPGG----FGPPPPGGPGAYGPPPTGFPPVGAPPPG 460
Query: 436 SPGXXGG 456
+ G GG
Sbjct: 461 AAGAPGG 467
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -1
Query: 690 PGGGXPPXXGGGG--GXNPPXXGGRXXGGXPP 601
PGG PP GG G G P GG G PP
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPP 437
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.44
Identities = 27/83 (32%), Positives = 27/83 (32%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP PP G PP P PPPP S P
Sbjct: 232 PPAGSPPPPP---PPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGS----PPP 282
Query: 445 XXGGGXXXGFFXXXXXPPPPPXG 513
GG PPPPP G
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRG 305
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/85 (30%), Positives = 27/85 (31%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP PP G PP +P PPP SP
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG----SPP 322
Query: 445 XXGGGXXXGFFXXXXXPPPPPXGXR 519
G G PPPPP R
Sbjct: 323 PAGTG----------SPPPPPRQKR 337
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.44
Identities = 27/83 (32%), Positives = 27/83 (32%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP PP G PP P PPPP S P
Sbjct: 253 PPAGSPPPPP---PPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGS----PPP 303
Query: 445 XXGGGXXXGFFXXXXXPPPPPXG 513
GG PPPPP G
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRG 326
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/85 (30%), Positives = 27/85 (31%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP PP G PP +P PPP SP
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG----SPP 343
Query: 445 XXGGGXXXGFFXXXXXPPPPPXGXR 519
G G PPPPP R
Sbjct: 344 PAGTG----------SPPPPPRQKR 358
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.44
Identities = 27/83 (32%), Positives = 27/83 (32%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP PP G PP P PPPP S P
Sbjct: 238 PPAGSPPPPP---PPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGS----PPP 288
Query: 445 XXGGGXXXGFFXXXXXPPPPPXG 513
GG PPPPP G
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRG 311
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/85 (30%), Positives = 27/85 (31%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G PPPPP PP G PP +P PPP SP
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG----SPP 328
Query: 445 XXGGGXXXGFFXXXXXPPPPPXGXR 519
G G PPPPP R
Sbjct: 329 PAGTG----------SPPPPPRQKR 343
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/63 (38%), Positives = 24/63 (38%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKGXXAPXXSPXK 328
GGGGGG P P P G GK K G G G G KG AP P
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPG--KPGKPG----APGAPGNPGKGASAP-CEPVT 143
Query: 327 XPP 319
PP
Sbjct: 144 QPP 146
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = -2
Query: 506 GGGGGXFXXXKKPXXXPPPXXPGEKKXXEKXGGGGXXXXXGAVRGGXKKXXXXPXXPPXK 327
GGGGG P P PG+ K G G G +G P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPG--KGASAPCEPVTQPPCQP 149
Query: 326 XPXXXPGGXXXGGGGGXP-PQG 264
P PG G G P P G
Sbjct: 150 CPGGPPGPAGPAGPPGPPGPDG 171
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/63 (38%), Positives = 24/63 (38%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKGXXAPXXSPXK 328
GGGGGG P P P G GK K G G G G KG AP P
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPG--KPGKPG----APGAPGNPGKGASAP-CEPVT 143
Query: 327 XPP 319
PP
Sbjct: 144 QPP 146
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = -2
Query: 506 GGGGGXFXXXKKPXXXPPPXXPGEKKXXEKXGGGGXXXXXGAVRGGXKKXXXXPXXPPXK 327
GGGGG P P PG+ K G G G +G P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPG--KGASAPCEPVTQPPCQP 149
Query: 326 XPXXXPGGXXXGGGGGXP-PQG 264
P PG G G P P G
Sbjct: 150 CPGGPPGPAGPAGPPGPPGPDG 171
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/63 (38%), Positives = 24/63 (38%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKGXXAPXXSPXK 328
GGGGGG P P P G GK K G G G G KG AP P
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPG--KPGKPG----APGAPGNPGKGASAP-CEPVT 143
Query: 327 XPP 319
PP
Sbjct: 144 QPP 146
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = -2
Query: 506 GGGGGXFXXXKKPXXXPPPXXPGEKKXXEKXGGGGXXXXXGAVRGGXKKXXXXPXXPPXK 327
GGGGG P P PG+ K G G G +G P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPG--KGASAPCEPVTQPPCQP 149
Query: 326 XPXXXPGGXXXGGGGGXP-PQG 264
P PG G G P P G
Sbjct: 150 CPGGPPGPAGPAGPPGPPGPDG 171
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/63 (38%), Positives = 24/63 (38%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKGXXAPXXSPXK 328
GGGGGG P P P G GK K G G G G KG AP P
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPG--KPGKPG----APGAPGNPGKGASAP-CEPVT 143
Query: 327 XPP 319
PP
Sbjct: 144 QPP 146
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = -2
Query: 506 GGGGGXFXXXKKPXXXPPPXXPGEKKXXEKXGGGGXXXXXGAVRGGXKKXXXXPXXPPXK 327
GGGGG P P PG+ K G G G +G P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPG--KGASAPCEPVTQPPCQP 149
Query: 326 XPXXXPGGXXXGGGGGXP-PQG 264
P PG G G P P G
Sbjct: 150 CPGGPPGPAGPAGPPGPPGPDG 171
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.5 bits (68), Expect = 1.0
Identities = 30/112 (26%), Positives = 31/112 (27%), Gaps = 1/112 (0%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGG-GGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXX 523
G GGG GGG G GGR GG
Sbjct: 70 GNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNN 129
Query: 522 XAXPXGGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGE 367
G GGGG + P G G GGGG R GG GE
Sbjct: 130 GGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAGE 181
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKG 358
GGGGGG + P G G GGGG R GG GG G
Sbjct: 130 GGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGG-RGGGGGRGGGGGGG 178
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 26.2 bits (55), Expect(2) = 2.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 687 GGGXPPXXGGGGGXNPPXXGGRXXGG 610
GGG GGGGG GG GG
Sbjct: 790 GGGGNGGSGGGGGGGGGGSGGSGGGG 815
Score = 22.6 bits (46), Expect(2) = 2.1
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKGXXA 349
G GG G G G GGG GG G G A
Sbjct: 807 GSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAGA 859
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 687 GGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
G G PP GG GG PP GG G P P
Sbjct: 188 GQGGPPGHGGMGGP-PPGQGGPGGPGGPGGP 217
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 690 PGG-GXPPXXGGGGGXNPPXXGGRXXGGXP 604
PGG G PP GG GG PP GG+ GG P
Sbjct: 168 PGGMGGPPGHGGMGG--PPGHGGQ--GGPP 193
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 687 GGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
G G PP GG GG PP GG G P P
Sbjct: 468 GQGGPPGHGGMGGP-PPGQGGPGGPGGPGGP 497
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 690 PGG-GXPPXXGGGGGXNPPXXGGRXXGGXP 604
PGG G PP GG GG PP GG+ GG P
Sbjct: 448 PGGMGGPPGHGGMGG--PPGHGGQ--GGPP 473
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 504 GGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGG 382
GGGGG P P + GGGG R GG
Sbjct: 50 GGGGGGNRGGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGG 90
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 702 KGXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
K GGG GGGG P GG PPAP
Sbjct: 610 KNNQAGGGPGGPGGGGGPPRGPGGGGGGGPTGPPAP 645
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 702 KGXXPGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
K GGG GGGG P GG PPAP
Sbjct: 610 KNNQAGGGPGGPGGGGGPPRGPGGGGGGGPTGPPAP 645
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 690 PGGGXPPXX-GGGGGXNPPXXGGRXXGGXPP 601
PG PP GGGGG PP R G PP
Sbjct: 793 PGMRPPPGAPGGGGGMYPPLIPTRPGPGGPP 823
Score = 24.6 bits (51), Expect(2) = 2.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXP 604
PGG P GG PP G R G P
Sbjct: 774 PGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 513 PXGGGGGGXXXXKKTPXXPPPXGP 442
P GGGG P P P GP
Sbjct: 799 PGAPGGGGGMYPPLIPTRPGPGGP 822
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 690 PGGGXPPXX-GGGGGXNPPXXGGRXXGGXPP 601
PG PP GGGGG PP R G PP
Sbjct: 793 PGMRPPPGAPGGGGGMYPPLIPTRPGPGGPP 823
Score = 24.6 bits (51), Expect(2) = 2.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXP 604
PGG P GG PP G R G P
Sbjct: 774 PGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 513 PXGGGGGGXXXXKKTPXXPPPXGP 442
P GGGG P P P GP
Sbjct: 799 PGAPGGGGGMYPPLIPTRPGPGGP 822
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = -1
Query: 672 PXXGGGGGXNP---PXXGGRXXGGXPPAP 595
P GGGGG P P GG GG PAP
Sbjct: 58 PSLGGGGGCCPPPAPACGGGCGGGVAPAP 86
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXN---PPXXGGRXXGGXPP 601
P GG PP GG G PP GG G PP
Sbjct: 1555 PMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPP 1587
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 25.0 bits (52), Expect(2) = 3.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGG 370
GGGGGG P GPRG G G GG
Sbjct: 123 GGGGGGGGCQCSPSSNTCPPGPRGPPGQAGLDGLPGAPGQPGSNGG 168
Score = 23.0 bits (47), Expect(2) = 3.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGG 610
G GGG GGGGG G GG
Sbjct: 86 GAAVGGGYGGAVGGGGGGGYGGGHGGGHGG 115
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 25.4 bits (53), Expect(2) = 3.9
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -1
Query: 507 GGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEGGEXKG 358
G GGGG GP G GGGG GG GG G
Sbjct: 123 GDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGG 172
Score = 22.6 bits (46), Expect(2) = 3.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -1
Query: 702 KGXXPGGGXPPXXGGGGGXNPPXXGGRXXGG 610
+G GGG GGGG GG GG
Sbjct: 96 QGGYGGGGDFGGGMGGGGYGGGGYGGGGDGG 126
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGG 610
G GGG GGGGG GGR GG
Sbjct: 86 GGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPPXXGGRXXGG 610
G GGG GGGGG GGR GG
Sbjct: 103 GRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 409 PPXFSXXFFSPGXXGGGXXXGFFXXXXXPPPPP 507
PP F + P GGG G PPPPP
Sbjct: 70 PPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPP 102
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 513 PXGGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGGCEG 373
P G G GG P P P GPRG+ G R G G
Sbjct: 180 PGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPGPPGPRG 226
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Frame = -1
Query: 699 GXXPGGGXPPXXGGGGGXNPP-----XXGGRXXGGXPP 601
G GGG GGGG + P GGR GG PP
Sbjct: 833 GGYGGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPP 870
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/80 (26%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = -2
Query: 503 GGGGXFXXXKKPXXXPPPXXPGEKKXXEKXGGGGXXXXXGAVRG-GXKKXXXXPXXPPXK 327
GGGG P P PG+ + G GG G P P +
Sbjct: 101 GGGGSCSGCCLPGPAGPSGAPGKPGRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQ 160
Query: 326 XPXXXPGGXXXGGGGGXPPQ 267
P PG G G P Q
Sbjct: 161 GPPGAPGSPGPQGNAGAPGQ 180
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 5.4
Identities = 30/117 (25%), Positives = 32/117 (27%)
Frame = +1
Query: 265 PWGGXPPPPPXXXPPGXXWGXFXGGXXGXXXXFXFPPLTAPXXXXXPPPPXFSXXFFSPG 444
P G P PP PPG G PP+ PPPP F F + G
Sbjct: 708 PPPGIPGYPPAPPPPGV----------GPPPPQGIPPMG--FDPNKPPPPMFQQGF-NAG 754
Query: 445 XXGGGXXXGFFXXXXXPPPPPXGXRXXXXXXXXXXXXXXXXXXXPRXXXXXGGGXPP 615
G PPPP G P GGG PP
Sbjct: 755 APPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -1
Query: 513 PXGGGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXR 397
P G G P PPP G R GGG R
Sbjct: 520 PPSSSGSGSNRRSGPPPPPPPPRSSGANGNRNGGGGNRR 558
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 687 GGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
GGG GGGGG GG PP P
Sbjct: 12 GGGGGGGGGGGGGGEAGYSGGAGVEAPPPPP 42
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +3
Query: 588 PPXGRGGXXXXXXXXXXGGFXPPPPXKXGGXPPRXXPLXG 707
PP G GG GG PPPP GG PP P+ G
Sbjct: 76 PPPGPGGIPPPPPMFA-GGI-PPPPPMMGGIPP-PPPMFG 112
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 18/83 (21%), Positives = 18/83 (21%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAPXXXXXXXXXXXXXXXXXXXXXXXXXAXP 511
P G P G N P G P P P
Sbjct: 960 PNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSDPVKPSPSGPSPNGPSPNGPSP 1019
Query: 510 XGGGGGGXXXXKKTPXXPPPXGP 442
G G TP P P GP
Sbjct: 1020 NGPSPNGPSPNGPTPNWPSPNGP 1042
Score = 22.6 bits (46), Expect(2) = 7.3
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 468 PXXPPPXGPRGKKXXRKXGGGG 403
P P P GP G K G G
Sbjct: 1053 PNKPGPNGPNGPSDPNKPGPNG 1074
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
P PP G GG PP G R GG PP P
Sbjct: 322 PSRFGPP--GMGGMPPPPPPGMRYPGGMPPPP 351
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 9.5
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Frame = -2
Query: 455 PPXXPGEKKXXEKXGGGGXXXXXGAV-RGGXK-KXXXXPXXPP-XKXPXXXPGGXXXGGG 285
PP PG G G GA + G K K P PP P PG G
Sbjct: 181 PPGPPGPDGDSGPNGEAGPNGEPGAPGKDGEKGKGEPGPAGPPGPPGPGGPPGDAGGAGS 240
Query: 284 GGXP-PQG 264
G P PQG
Sbjct: 241 DGAPGPQG 248
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 690 PGGGXPPXXGGGGGXNPPXXGGRXXGGXPPAP 595
P PP G GG PP G R GG PP P
Sbjct: 332 PSRFGPP--GMGGMPPPPPPGMRYPGGMPPPP 361
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 504 GGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGG 382
GGGGG P P + GGGG R GG
Sbjct: 50 GGGGGGNRGGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGG 90
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 504 GGGGGXXXXKKTPXXPPPXGPRGKKXXRKXGGGGXRXXXGG 382
GGGGG P P + GGGG R GG
Sbjct: 50 GGGGGGNRGGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGG 90
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 675 PPXXGGGGGXNPPXXGGRXXGGXPP 601
PP GGG G PP G + GG PP
Sbjct: 673 PP--GGGQGPPPPPQGQQYYGGPPP 695
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +1
Query: 280 PPP--PPXXXPPGXXWGXFXGG-XXGXXXXFXFPPLTAPXXXXXPPPP 414
PPP PP PPG F GG +PP P PPPP
Sbjct: 55 PPPSLPPSTMPPGPHGMPFMGGPPPHHQYHLQYPP---PHGLGPPPPP 99
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 675 PPXXGGGGGXNPPXXGGRXXGGXPP 601
PP GGG G PP G + GG PP
Sbjct: 673 PP--GGGQGPPPPPQGQQYYGGPPP 695
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,955,016
Number of Sequences: 27780
Number of extensions: 279928
Number of successful extensions: 3353
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2775
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2741106356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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