Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H06
         (912 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.82 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   4.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   4.4  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
 Frame = +2

Query: 206 GYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRAL-LTVW 382
           G K  +  ++ +P+    K+N  E  E   +      V +    +    HGL  L   +W
Sbjct: 135 GIKLSINIILSDPNTNKLKLNTNESYELTVLKSDSLAVRLSAANFFGARHGLETLNQLIW 194

Query: 383 AEHMSEDCR 409
            + +  + R
Sbjct: 195 FDEVVNELR 203


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 176 SKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVE 286
           S P HL    GY   +  + R PD+   KIN K  ++
Sbjct: 594 SHPFHLH---GYAFNVVGIGRSPDQNVKKINLKHALD 627


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 176 SKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVE 286
           S P HL    GY   +  + R PD+   KIN K  ++
Sbjct: 594 SHPFHLH---GYAFNVIGIGRSPDQNVKKINLKHALD 627


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 484 LILPFLTGFSESXLLAFVPVFVEATSTVFRHMLRPD 377
           L  PFL       L +FVP+ V A   +F + +  D
Sbjct: 174 LFYPFLPSDVSYNLFSFVPLVVNALDHLFLNDILSD 209


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 484 LILPFLTGFSESXLLAFVPVFVEATSTVFRHMLRPD 377
           L  PFL       L +FVP+ V A   +F + +  D
Sbjct: 130 LFYPFLPSDVSYNLFSFVPLVVNALDHLFLNDILSD 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,180
Number of Sequences: 336
Number of extensions: 3328
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)