Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H04
         (879 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF540388-1|AAO16209.1|  370|Homo sapiens c-maf proto-oncogene pr...    30   9.6  
AF055377-1|AAC27038.1|  403|Homo sapiens long form transcription...    30   9.6  
AF055376-1|AAC27037.1|  373|Homo sapiens short form transcriptio...    30   9.6  

>AF540388-1|AAO16209.1|  370|Homo sapiens c-maf proto-oncogene
           protein.
          Length = 370

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +1

Query: 187 SMTPNPFFAQPTVGNGYEP---IDNRPYIVNPPKDYNPNGNGYEPID 318
           S+ P+P F+ P+ G+G E    +++  ++   P+  NP   G+ P D
Sbjct: 66  SVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPED 112


>AF055377-1|AAC27038.1|  403|Homo sapiens long form transcription
           factor C-MAF protein.
          Length = 403

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +1

Query: 187 SMTPNPFFAQPTVGNGYEP---IDNRPYIVNPPKDYNPNGNGYEPID 318
           S+ P+P F+ P+ G+G E    +++  ++   P+  NP   G+ P D
Sbjct: 66  SVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPED 112


>AF055376-1|AAC27037.1|  373|Homo sapiens short form transcription
           factor C-MAF protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +1

Query: 187 SMTPNPFFAQPTVGNGYEP---IDNRPYIVNPPKDYNPNGNGYEPID 318
           S+ P+P F+ P+ G+G E    +++  ++   P+  NP   G+ P D
Sbjct: 66  SVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPED 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,127,168
Number of Sequences: 237096
Number of extensions: 2368298
Number of successful extensions: 7492
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7490
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)