Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_H01
(1454 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0427 - 33857008-33857137,33857224-33857258,33857966-338580... 33 0.56
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.98
06_03_1326 - 29355467-29355817 32 1.3
04_04_1413 - 33386049-33386339 31 1.7
06_03_0790 - 24636805-24637770 31 2.3
02_04_0400 - 22608519-22608844,22609044-22609122 31 2.3
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 2.3
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 24 5.8
08_02_0410 - 16842306-16842950,16844994-16845182 29 6.9
07_03_0559 + 19475893-19476783 29 6.9
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 6.9
04_03_0904 + 20717005-20718087 29 6.9
02_01_0158 - 1103461-1104186 29 6.9
07_03_1136 + 24218601-24218734,24218769-24219906 29 9.2
03_01_0502 - 3779551-3779562,3779863-3780012,3780129-3780172,378... 29 9.2
>03_06_0427 -
33857008-33857137,33857224-33857258,33857966-33858046,
33858213-33858338,33858410-33858568,33858797-33858934,
33859084-33859155,33859359-33860273
Length = 551
Score = 33.1 bits (72), Expect = 0.56
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
G GG GGGGG G G G GG C G G
Sbjct: 41 GGGGGGGGGGSGGGGGGGGGGGGGGGSGGGCGGGGG 76
Score = 32.3 bits (70), Expect = 0.98
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGG 212
G GG GGGGG CG G G+ GG
Sbjct: 57 GGGGGGGGGGSGGGCGGGGGGGGGSSGGG 85
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.98
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = -3
Query: 357 PXPPXPXPTPPXTPXRTXTHXXXXXXXLXXXTXQIPXTXKXXPXPPGTDRXXAXPTPXP* 178
P PP P P PP P R+ L + P P PP P P P
Sbjct: 600 PSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPP--PPPPPPPPSLPNRLVPPPPAPG 657
Query: 177 XA-RIXXPRHXPXPP 136
+ P P PP
Sbjct: 658 IGNKFPAPPPPPPPP 672
Score = 25.4 bits (53), Expect(2) = 7.3
Identities = 19/79 (24%), Positives = 23/79 (29%)
Frame = -3
Query: 351 PPXPXPTPPXTPXRTXTHXXXXXXXLXXXTXQIPXTXKXXPXPPGTDRXXAXPTPXP*XA 172
PP P P PP + +P P PP + P P P
Sbjct: 585 PPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPP--PPPPLPNHSVLPPPPPPPPP 642
Query: 171 RIXXPRHXPXPPLXFLKNK 115
R P PP + NK
Sbjct: 643 PSLPNRLVPPPPAPGIGNK 661
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 357 PXPPXPXPTPP 325
P PP P P PP
Sbjct: 544 PPPPPPPPPPP 554
>06_03_1326 - 29355467-29355817
Length = 116
Score = 31.9 bits (69), Expect = 1.3
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
G GG GGG G G K G G+ GGR G G
Sbjct: 5 GGGGGGGGKGGGGGGGGGKGGGGGSGGGGRSGGGGG 40
>04_04_1413 - 33386049-33386339
Length = 96
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 132 GGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
GG GGGGG CG G G GG C G G
Sbjct: 62 GGGGGGGGGGGGCG----GGGGGGGGGGCGGGGG 91
>06_03_0790 - 24636805-24637770
Length = 321
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
G GG GGGGG G G G GGR G G
Sbjct: 92 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGG 127
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
G GG GGGGG G G G GGR G G
Sbjct: 35 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGG 70
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
G GG GGGGG G G G GGR G G
Sbjct: 86 GGGGRGGGGGGGYGGGGGGGRGGGGGGGGRGGGGRG 121
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 24.2 bits (50), Expect(2) = 5.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 351 PPXPXPTPPXTP 316
PP P PTPP P
Sbjct: 395 PPPPPPTPPPPP 406
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 10/34 (29%), Positives = 12/34 (35%)
Frame = -3
Query: 426 PXSXPGGXXXXEXXRXXXXXXXXPXPPXPXPTPP 325
P + GG + P PP P P PP
Sbjct: 343 PEAQSGGAGHVKEDEAESGNMRPPPPPPPPPPPP 376
>08_02_0410 - 16842306-16842950,16844994-16845182
Length = 277
Score = 29.5 bits (63), Expect = 6.9
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXG--ARXGGRCXG 224
G G GGG G V C R G G A+ GGR G
Sbjct: 204 GVGVCGGGAGGVGVCARSGEGGGGWRAKKGGRGGG 238
>07_03_0559 + 19475893-19476783
Length = 296
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXG 224
G G GGGGG + G G G GG C G
Sbjct: 70 GGGFRGGGGGGLGGGGGFGGGGGGGLGGGGCEG 102
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.5 bits (63), Expect = 6.9
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
G G GGGGG G + G G GGR G G
Sbjct: 45 GRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGG 80
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 6.9
Identities = 21/76 (27%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = -3
Query: 357 PXPPXPXPTPPXTPXR-TXTHXXXXXXXLXXXTXQIPXTXKXXPXP-PGTDRXXAXPTPX 184
P P P P P P H + P P P P T PTP
Sbjct: 35 PTPVKPAPKPEKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPP 94
Query: 183 P*XARIXXPRHXPXPP 136
P + P H P PP
Sbjct: 95 PYTPKPTPPAHTPTPP 110
Score = 29.5 bits (63), Expect = 6.9
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = -3
Query: 357 PXPPXPXPTP-PXTPXRTXTHXXXXXXXLXXXTXQIPXTXKXXPXP--PGTDRXXAXPTP 187
P PP PTP P P P T K P P P T + PTP
Sbjct: 107 PTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPTP 166
Query: 186 XP*XARIXXPRHXPXP 139
P P + P P
Sbjct: 167 TPYTPTPTPPSYKPQP 182
>02_01_0158 - 1103461-1104186
Length = 241
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCG------RXKXXGXGARXGGRCXG 224
G GG GGGGG CG R G G GGR G
Sbjct: 182 GGGGGGGGGGACYNCGETGHLARDCYNGGGGGGGGRFGG 220
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 132 GGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXGXP 239
GG GGGGG + G G GG G G P
Sbjct: 277 GGGGGGGGALENAREDGAEGGGGGGGGGGGGGHGAP 312
>03_01_0502 -
3779551-3779562,3779863-3780012,3780129-3780172,
3780256-3780319,3780422-3780655,3780765-3780908,
3781027-3781221,3781447-3781522,3781689-3781788,
3781955-3781988,3782076-3782160,3782226-3782290,
3782380-3782478,3782810-3782875,3785485-3785721
Length = 534
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGG 212
G GG GGGGG G GAR GG
Sbjct: 6 GAGGGGGGGGGGLELSVGVGGGGGARGGG 34
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,938,505
Number of Sequences: 37544
Number of extensions: 107484
Number of successful extensions: 1405
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4629241092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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