Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_H01
         (1454 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    33   0.98 
X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    31   3.0  
BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p pro...    31   3.0  
AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...    31   3.0  
AY113490-1|AAM29495.1|  158|Drosophila melanogaster RE47308p pro...    31   3.9  
AE014298-1899|AAF48264.2|  158|Drosophila melanogaster CG1987-PA...    31   3.9  
AY119041-1|AAM50901.1|  393|Drosophila melanogaster LP06455p pro...    31   5.2  
AE014297-416|AAF51905.3|  393|Drosophila melanogaster CG10303-PA...    31   5.2  
U13178-1|AAA86955.1|  404|Drosophila melanogaster RNA binding pr...    30   9.1  
L37083-1|AAC41563.1|  404|Drosophila melanogaster RNA binding pr...    30   9.1  
BT004875-1|AAO45231.1|  399|Drosophila melanogaster LD22761p pro...    30   9.1  
AY069682-1|AAL39827.1| 1332|Drosophila melanogaster LD45430p pro...    30   9.1  
AF276964-1|AAO23023.1| 1375|Drosophila melanogaster lingerer pro...    30   9.1  
AF276963-1|AAO23022.1| 1332|Drosophila melanogaster lingerer pro...    30   9.1  
AE014298-2351|AAN09389.1|  399|Drosophila melanogaster CG3606-PB...    30   9.1  
AE014298-2350|AAF48578.2|  399|Drosophila melanogaster CG3606-PA...    30   9.1  
AE013599-579|AAX52724.1| 1375|Drosophila melanogaster CG8715-PD,...    30   9.1  
AE013599-578|AAF59144.3| 1332|Drosophila melanogaster CG8715-PB,...    30   9.1  
AE013599-577|AAS64895.2| 1343|Drosophila melanogaster CG8715-PC,...    30   9.1  
AE013599-576|AAM68848.2| 1343|Drosophila melanogaster CG8715-PA,...    30   9.1  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 33.1 bits (72), Expect = 0.98
 Identities = 21/73 (28%), Positives = 26/73 (35%)
 Frame = -3

Query: 351 PPXPXPTPPXTPXRTXTHXXXXXXXLXXXTXQIPXTXKXXPXPPGTDRXXAXPTPXP*XA 172
           PP   PT P T     T+       L   T ++P        PP T      PT  P  A
Sbjct: 281 PPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTRP-PA 339

Query: 171 RIXXPRHXPXPPL 133
               P + P PP+
Sbjct: 340 TYLPPTNKPPPPV 352



 Score = 31.5 bits (68), Expect = 3.0
 Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
 Frame = -3

Query: 357 PXPPXPXPTPPXT--PXR------TXTHXXXXXXXLXXXTXQIPXTXKXXPXPPGTDRXX 202
           P PP P  TPP T  P R        T+       L   T ++P        PP T    
Sbjct: 228 PPPPPPPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPT 287

Query: 201 AXPTPXP*XARIXXPRHXPXPPL 133
             PT  P  A    P + P PP+
Sbjct: 288 RPPTTRP-PATYLPPTNKPLPPV 309


>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
           protein.
          Length = 147

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG GGGGG     G     G G   GGR  G  G
Sbjct: 18  GGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGG 53



 Score = 29.9 bits (64), Expect = 9.1
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG GGGGG        +  G G   GGR  G  G
Sbjct: 66  GGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRG 101


>BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p
           protein.
          Length = 331

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG GGGGG     G     G G   GGR  G  G
Sbjct: 11  GGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGG 46


>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
           protein.
          Length = 344

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG GGGGG     G     G G   GGR  G  G
Sbjct: 11  GGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGG 46



 Score = 29.9 bits (64), Expect = 9.1
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG GGGGG        +  G G   GGR  G  G
Sbjct: 59  GGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRG 94


>AY113490-1|AAM29495.1|  158|Drosophila melanogaster RE47308p
           protein.
          Length = 158

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG GGGGG     GR    G  A  GGR     G
Sbjct: 92  GGGGGGGGGGGSGGGGRGGGSGARAGGGGRAGDGGG 127


>AE014298-1899|AAF48264.2|  158|Drosophila melanogaster CG1987-PA
           protein.
          Length = 158

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG GGGGG     GR    G  A  GGR     G
Sbjct: 92  GGGGGGGGGGGSGGGGRGGGSGARAGGGGRAGDGGG 127


>AY119041-1|AAM50901.1|  393|Drosophila melanogaster LP06455p
           protein.
          Length = 393

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGR 215
           G GG GGGGG +   G     G G   GGR
Sbjct: 173 GLGGNGGGGGGLLGGGGGDNGGGGGLLGGR 202


>AE014297-416|AAF51905.3|  393|Drosophila melanogaster CG10303-PA
           protein.
          Length = 393

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGR 215
           G GG GGGGG +   G     G G   GGR
Sbjct: 173 GLGGNGGGGGGLLGGGGGDNGGGGGLLGGR 202


>U13178-1|AAA86955.1|  404|Drosophila melanogaster RNA binding
           protein protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXGXP 239
           G GG GGGGG           G G R GG      G P
Sbjct: 355 GGGGGGGGGGGYSRFNDNNGGGRGGRGGGGGNRRDGGP 392


>L37083-1|AAC41563.1|  404|Drosophila melanogaster RNA binding
           protein protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXGXP 239
           G GG GGGGG           G G R GG      G P
Sbjct: 355 GGGGGGGGGGGYSRFNDNNGGGRGGRGGGGGNRRDGGP 392


>BT004875-1|AAO45231.1|  399|Drosophila melanogaster LD22761p
           protein.
          Length = 399

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXGXP 239
           G GG GGGGG           G G R GG      G P
Sbjct: 350 GGGGGGGGGGGYSRFNDNNGGGRGGRGGGGGNRRDGGP 387


>AY069682-1|AAL39827.1| 1332|Drosophila melanogaster LD45430p
           protein.
          Length = 1332

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG G GGG V   GR      G R GGR  G  G
Sbjct: 235 GPGGGGRGGGFVSRSGR-----GGGRMGGRTGGPRG 265


>AF276964-1|AAO23023.1| 1375|Drosophila melanogaster lingerer
           protein type2 protein.
          Length = 1375

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG G GGG V   GR      G R GGR  G  G
Sbjct: 235 GPGGGGRGGGFVSRSGR-----GGGRMGGRTGGPRG 265


>AF276963-1|AAO23022.1| 1332|Drosophila melanogaster lingerer
           protein type1 protein.
          Length = 1332

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG G GGG V   GR      G R GGR  G  G
Sbjct: 235 GPGGGGRGGGFVSRSGR-----GGGRMGGRTGGPRG 265


>AE014298-2351|AAN09389.1|  399|Drosophila melanogaster CG3606-PB,
           isoform B protein.
          Length = 399

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXGXP 239
           G GG GGGGG           G G R GG      G P
Sbjct: 350 GGGGGGGGGGGYSRFNDNNGGGRGGRGGGGGNRRDGGP 387


>AE014298-2350|AAF48578.2|  399|Drosophila melanogaster CG3606-PA,
           isoform A protein.
          Length = 399

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXGXP 239
           G GG GGGGG           G G R GG      G P
Sbjct: 350 GGGGGGGGGGGYSRFNDNNGGGRGGRGGGGGNRRDGGP 387


>AE013599-579|AAX52724.1| 1375|Drosophila melanogaster CG8715-PD,
           isoform D protein.
          Length = 1375

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG G GGG V   GR      G R GGR  G  G
Sbjct: 235 GPGGGGRGGGFVSRSGR-----GGGRMGGRTGGPRG 265


>AE013599-578|AAF59144.3| 1332|Drosophila melanogaster CG8715-PB,
           isoform B protein.
          Length = 1332

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG G GGG V   GR      G R GGR  G  G
Sbjct: 235 GPGGGGRGGGFVSRSGR-----GGGRMGGRTGGPRG 265


>AE013599-577|AAS64895.2| 1343|Drosophila melanogaster CG8715-PC,
           isoform C protein.
          Length = 1343

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG G GGG V   GR      G R GGR  G  G
Sbjct: 235 GPGGGGRGGGFVSRSGR-----GGGRMGGRTGGPRG 265


>AE013599-576|AAM68848.2| 1343|Drosophila melanogaster CG8715-PA,
           isoform A protein.
          Length = 1343

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = +3

Query: 126 GXGGXGGGGGXVXXCGRXKXXGXGARXGGRCXGXXG 233
           G GG G GGG V   GR      G R GGR  G  G
Sbjct: 235 GPGGGGRGGGFVSRSGR-----GGGRMGGRTGGPRG 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,078,154
Number of Sequences: 53049
Number of extensions: 152583
Number of successful extensions: 1289
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8046742176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)