Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_G24
         (935 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical pr...    35   0.073
U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical pr...    34   0.17 
AC006666-4|AAK21415.1|  109|Caenorhabditis elegans Hypothetical ...    32   0.68 
AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical ...    29   3.6  
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical pr...    29   6.3  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   6.3  
AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical ...    29   6.3  
AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical...    29   6.3  
Z69658-1|CAA93481.1|  418|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U88172-5|AAB42260.1|  483|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical
           protein F47H4.9 protein.
          Length = 569

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +3

Query: 198 LRHFSICLLKQVILANPTENYTIQSFPLTTMMQPKDASNFNPNR 329
           LR+F   +L++++L +PT+N  I+   L  M Q K+A NF  +R
Sbjct: 431 LRNFKSGILQEIVLGSPTDNADIEK--LVDMRQWKEAKNFESSR 472


>U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical
           protein W03B1.8 protein.
          Length = 705

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 NSVIS-ADYDDATKRCEQLQSEPNGSYIIKNTVTELLNNAESNTINFSYKLWTHW 424
           N+VI   DY+ A KR +QL  + NG  ++ + + E  NN+      F  K + +W
Sbjct: 607 NTVIKLGDYEMARKRYDQLVKDCNGKCVLVDYLPEFYNNSTGTFRYFDDKGFAYW 661


>AC006666-4|AAK21415.1|  109|Caenorhabditis elegans Hypothetical
           protein H31G24.1 protein.
          Length = 109

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +1

Query: 742 PDPPPXXPPXXAPXQAPXP 798
           P PPP  PP  AP QAP P
Sbjct: 84  PPPPPPPPPQPAPAQAPAP 102


>AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.5 protein.
          Length = 287

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -2

Query: 295 CIIVVSGND*IV*FSVGFARITCFNRHIEKCRNYNRQGC*NLQFHLEFSLRFELLYP 125
           C+I ++ +  IV     F    CFNR++ +C    RQ   + Q H++  +   +  P
Sbjct: 122 CLICLASSPIIVTACDHFMHFACFNRYLTECLTGLRQEIQDAQKHMKEQVETNIFCP 178


>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
           protein H06I04.5 protein.
          Length = 1138

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +1

Query: 724 PXXXPHPDPPPXXPPXXAPXQAPXPHAXXILIXPXXSPPXIVP 852
           P     P+P P   P   P   P P    +   P  SPP IVP
Sbjct: 675 PAEPSAPEPKPAPKPDPKPDPKPDPKPDPVPAKP-VSPPVIVP 716


>Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical
           protein F47B8.5 protein.
          Length = 579

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
 Frame = +1

Query: 724 PXXXPHPDPPPXXPPXXAPXQAPXPHAXXILIXPXXSP--PXIVPXXXPRXSAXP 882
           P   P P+  P   P  AP  AP P A      P  +P  P  VP   P  +  P
Sbjct: 489 PAPAPAPEAAPAPEPAPAPAPAPAPEAAP-AAAPDAAPAEPAPVPEVAPAPAPAP 542



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +1

Query: 724 PXXXPHPDPPPXXPPXXAPXQAPXPHAXXILIXPXXSPPXIVP 852
           P   P P P P   P  AP  AP   A    + P  +P    P
Sbjct: 503 PAPAPAPAPAPEAAPAAAPDAAPAEPAPVPEVAPAPAPAPAAP 545


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/50 (34%), Positives = 17/50 (34%)
 Frame = +1

Query: 742 PDPPPXXPPXXAPXQAPXPHAXXILIXPXXSPPXIVPXXXPRXSAXPHQS 891
           P P P  PP   P Q   P        P   PP   P   P  S  P QS
Sbjct: 40  PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQS 89


>AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical
           protein Y47H10A.4 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 206 FFNMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSE 325
           FFN+++E  DSG+ +    N V   DY   TK  E  Q +
Sbjct: 41  FFNLNIEVPDSGQGEN---NMVSFLDYISQTKCLEDAQPD 77


>AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.1 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/54 (25%), Positives = 18/54 (33%)
 Frame = +1

Query: 724 PXXXPHPDPPPXXPPXXAPXQAPXPHAXXILIXPXXSPPXIVPXXXPRXSAXPH 885
           P   P+P+P P   P   P   P P     L       P + P   P     P+
Sbjct: 229 PKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPN 282


>Z69658-1|CAA93481.1|  418|Caenorhabditis elegans Hypothetical
           protein C36H8.1 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = +1

Query: 736 PHPDPPPXXPPXXAPXQAPXPHAXXILIXPXXSPPXIVPXXXPRXSAXP 882
           P P PPP  PP      AP P    + + P    P  VP    + +  P
Sbjct: 178 PPPRPPPQEPPKPVEQAAPPPPPAPMPV-PVEKAPEPVPAPVEQIAPPP 225


>U88172-5|AAB42260.1|  483|Caenorhabditis elegans Hypothetical
           protein ZK354.8 protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 17/49 (34%), Positives = 19/49 (38%)
 Frame = +1

Query: 736 PHPDPPPXXPPXXAPXQAPXPHAXXILIXPXXSPPXIVPXXXPRXSAXP 882
           P P  PP  PP  AP Q P P        P    P ++    PR S  P
Sbjct: 92  PPPSDPPPPPPPVAPHQ-PPPQLATSAQPP---QPPVINSQLPRMSPAP 136


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = +1

Query: 736 PHPDPPPXXPPXXAPXQAPXPHAXXILIXPXXSPPXIVPXXXPR 867
           P P PPP  P    P   P          P   PP   P   PR
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,402,663
Number of Sequences: 27780
Number of extensions: 281625
Number of successful extensions: 1480
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)