Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_G20
(1105 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.27
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 3.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 3.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.5
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 7.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 7.8
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.27
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +3
Query: 567 PPXXPPPXKQX-GXXXPXPLXPPXKKKXPXXPPPXXGG 677
PP PPP Q P P PP P PPP GG
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 679 PPPXXGGGXXGXFFFXGGXRGXGXXXPXCFXGGGXXGG 566
PPP GGG G GG G C GGG GG
Sbjct: 57 PPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 94
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 679 PPPXXGGGXXGXFFFXGGXRGXGXXXPXCFXGGGXXGG 566
PPP GGG G GG G G GGG GG
Sbjct: 114 PPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGG 151
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 570 PXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPP 665
P PPP ++ P P P ++ P PPP
Sbjct: 546 PTPPPPPREPTPREPTPEPEPVREPTPPPPPP 577
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 566 PPXPXPPXKTXXXXXPXPPPSSXKKKXSXXPXPPAGG 676
PP P PP + P PPP P PP G
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILG 105
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXGGG 680
PP PPP P PP P PPP GG
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXG 674
PP PPP G P P PP K PPP G
Sbjct: 758 PPPPPPPP--GGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXGGG 680
PP PPP P PP P PPP GG
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXG 674
PP PPP G P P PP K PPP G
Sbjct: 758 PPPPPPPP--GGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +3
Query: 570 PXXPPPXKQXGXXXPXPLXP--PXKKKXPXXPPPXXG 674
P PPP +Q G P P P P ++ PPP G
Sbjct: 721 PGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHG 757
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +3
Query: 570 PXXPPPXKQXGXXXPXPLXP--PXKKKXPXXPPPXXG 674
P PPP +Q G P P P P ++ PPP G
Sbjct: 721 PGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXGGG 680
PP PPP P PP P PPP GG
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXG 674
PP PPP G P P PP K PPP G
Sbjct: 341 PPPPPPPP--GGCPPPPPPPPPGGFKGGPPPPPPPG 374
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXGGG 680
PP PPP +Q P P P + P P GG
Sbjct: 104 PPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGG 141
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXGGG 680
PP PPP +Q P P P + P P GG
Sbjct: 104 PPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGG 141
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 567 PPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPPXXGGG 680
PP PPP +Q P P P + P P GG
Sbjct: 104 PPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGG 141
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 552 CFFFXPPXXPPPXKQXGXXXPXPLXPPXKKKXPXXPPP 665
C PP PPP P P PP PPP
Sbjct: 22 CCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPP 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,806,238
Number of Sequences: 27780
Number of extensions: 211702
Number of successful extensions: 1681
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2981737830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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