Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_G19
(829 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_21673| Best HMM Match : Troponin (HMM E-Value=0.34) 32 0.49
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 31 0.86
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 31 1.5
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 31 1.5
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 30 2.0
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 30 2.0
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 29 3.5
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 29 4.6
SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.0
>SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 IEHHTKEFHKTLEQQFNSLTKSKDA-QDFSKAWKDGSESVLQQLNAFAKSLQGALGDANG 376
I HH + + +E+ N T ++ QDF ++ + S + N ++ +LGD
Sbjct: 248 IGHHIGDRGRVVERSLNRRTNEEERKQDFINMDENDAPSFDNEWNHRTRTAMHSLGDVRK 307
Query: 377 KAKEALEQSRQNIER 421
+ ALE+ R+ +R
Sbjct: 308 DTRRALEEPRKRHDR 322
>SB_21673| Best HMM Match : Troponin (HMM E-Value=0.34)
Length = 337
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +2
Query: 194 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAW---------KDGSESVLQQLNAFAKS 346
KD +++ + ++ + + + KDA ++ W +D SES ++N F
Sbjct: 141 KDKTREAEKYQRQIKDNESEIQRLKDAIEYRDNWLAERGLNLYEDNSESNKDEINVFESL 200
Query: 347 LQGALGDANGKAKEALEQSR 406
+G+ D +G K + +SR
Sbjct: 201 REGSTIDESGSEKSSFSESR 220
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = +3
Query: 456 VEKNATALREKLQAAVQNTVQESQKLAKKV--------SSNVQETNEKLAPKIKAAYDDF 611
VEK A L+EK Q + V + ++ +K S ++ETN L K ++ +
Sbjct: 561 VEKKAKELKEKYQGELNEKVNKVERTLRKQYEEDIVKGRSELEETNRTLKEKYESEVSEI 620
Query: 612 AKNTQEVIKKIQEAANAKQ 668
++V ++ QE A+Q
Sbjct: 621 MLQMEQVQQRNQEVFEAQQ 639
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 194 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN 331
+ IEH + K +QQF+S K+ D D S K+ + ++ L+
Sbjct: 468 RSIEHKIQRLEKKFDQQFSSTEKNMDKNDSSLPKKEIFQQIVTDLS 513
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/65 (24%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 459 EKNATALREKLQAAVQNTVQ-ESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVI 635
E+ AL EK + T+Q E +K +K+ + ++ET E + ++++ + + + T+++
Sbjct: 225 EEKLNALLEKEKIVEMTTLQLEDEK--EKIKNELEETKELMQAELESQAETYTEQTRKMH 282
Query: 636 KKIQE 650
++QE
Sbjct: 283 SELQE 287
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +3
Query: 465 NATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKI 644
+ATA +E+L++AV+ + KL K+S+ ET K A Y+ + ++ +K++
Sbjct: 964 DATASKEELESAVEEKAKAETKLKVKISA--LETKLKKAVNETKRYESSSSQLKQQVKEL 1021
Query: 645 Q 647
+
Sbjct: 1022 E 1022
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 477 LREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKI 644
L+E+ ++ + +Q+ +K K+ S Q+T APK K A TQ KI
Sbjct: 340 LKEEYKSLQRQAMQDLKKQLKQTSEAQQQTETNSAPKAKPAKPSVPSPTQTAPNKI 395
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRK 442
+G+E+ + QL +SLQ L DA +++ L++S +E ++ K
Sbjct: 420 EGTETAIHQLKKENESLQTRLSDAQALSQKQLKESSSRLEEMHQQHNK 467
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 459 EKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQ 626
EKN L E +A+QNT+Q + + E A KI+A + K T+
Sbjct: 272 EKNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEADFAAKIEAMEAELQKVTE 327
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 176 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQG 355
D DFFK++ TKEF + ++ ++ K A + S +KD E++ Q A K+++G
Sbjct: 1012 DITDFFKELGPATKEFAEESVKKVCAVYKF--ALNSSSDFKDFGENMESQSIAIMKTVKG 1069
Query: 356 ALGDA 370
+ +A
Sbjct: 1070 DVQNA 1074
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/69 (21%), Positives = 29/69 (42%)
Frame = +3
Query: 453 NVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEV 632
N+E + A+ + ++ VQN + E V S + E + + D +
Sbjct: 1055 NMESQSIAIMKTVKGDVQNALDEIMNFTITVDSLIDEIEKNFTVATRGFVSDSLGDLSRS 1114
Query: 633 IKKIQEAAN 659
+K IQ+ A+
Sbjct: 1115 LKAIQDLAD 1123
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 431 PRPCARCSASTVPKPPWPCRSRLRALPGD 345
P+ RC +S PW C S + AL GD
Sbjct: 821 PKRIPRCESSETRHWPWSCASGIAALVGD 849
>SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 468 ATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQ 647
A +++ QA + T E+QKL + +++ QETNE + K + +KNTQ+ +
Sbjct: 72 AEKIKQLEQALKEKTHNETQKLDRILATCHQETNEVINSK---SISHESKNTQKRSPTLT 128
Query: 648 EAANAKQ 668
+ KQ
Sbjct: 129 MTEHCKQ 135
>SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 428 RPCARCSASTVPKPPWPCRSRLRALPGD 345
+ C C P PP PC+ R+ LP D
Sbjct: 121 KSCFSCRRRQQPPPPPPCQQRMADLPVD 148
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +3
Query: 471 TALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQE 650
TA + K ++ Q+ ++ A+KV S QET+ + +DD +++ +I + +
Sbjct: 362 TAKKRKKRSKWIGRRQKVKRRARKVPSGCQETSSSIINGNDEEFDDENMHSETIITE-NQ 420
Query: 651 AANAKQ*ASILNSH 692
N + +SI+N +
Sbjct: 421 TINEETSSSIINGN 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,033,193
Number of Sequences: 59808
Number of extensions: 347527
Number of successful extensions: 1408
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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