Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_G17
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    25   4.9  
AF078789-1|AAK21515.1|  392|Caenorhabditis elegans Hypothetical ...    29   5.7  
AF039720-9|AAK68360.2|  676|Caenorhabditis elegans Hypothetical ...    29   5.7  
AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    28   10.0 
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    28   10.0 

>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 25.4 bits (53), Expect(2) = 4.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 837 PPPPPXXXPPP 869
           PPPPP   PPP
Sbjct: 512 PPPPPPPPPPP 522



 Score = 21.8 bits (44), Expect(2) = 4.9
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 810 PFPXXXXXXPPPPPXXXP 863
           P P      PPPPP   P
Sbjct: 487 PQPAEVSKSPPPPPPLPP 504


>AF078789-1|AAK21515.1|  392|Caenorhabditis elegans Hypothetical
           protein Y44E3B.2 protein.
          Length = 392

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -2

Query: 282 SPSSFCPKVPKTLPPPICLSQVTSRG-CR-LEDCPL 181
           SP  FC   P    PP C+S+V   G CR  ED P+
Sbjct: 321 SPYLFCYIPPNNEHPPSCVSKVRRNGVCRGFEDYPI 356


>AF039720-9|AAK68360.2|  676|Caenorhabditis elegans Hypothetical
           protein F33D11.9b protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = -3

Query: 308 LCCNQLFQRVHHRFVPKCQRPCLPPFVCPK*RHEGVALRIAR*SSNLPRNQKVRKLL 138
           L    LF  V+       +   +P  V PK    G+A+++ R  S+LP+++  ++L+
Sbjct: 53  LSAQWLFDPVNMEVTRISEHSLMPGLVTPKFDKSGIAIQLYRRFSDLPKSKSQQELI 109


>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 871 GGGGXXXGGGGGXXXXXXGKGIF 803
           GGGG   GGGGG      G G F
Sbjct: 189 GGGGGGMGGGGGSGGSGGGSGRF 211


>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 871 GGGGXXXGGGGGXXXXXXGKGI 806
           GGGG   GGGGG      G G+
Sbjct: 14  GGGGGGGGGGGGEAGYSGGAGV 35


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 871 GGGGXXXGGGGGXXXXXXGKG 809
           GGGG   GGGGG      G+G
Sbjct: 116 GGGGGRGGGGGGRGGGGRGRG 136


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 810 PFPXXXXXXPPPPPXXXPPP 869
           P P      PPPPP   PPP
Sbjct: 125 PAPYQQQPPPPPPPPHYPPP 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,828,482
Number of Sequences: 27780
Number of extensions: 378947
Number of successful extensions: 2517
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1966
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)