Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_G13
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-11|CAA20962.2|  355|Caenorhabditis elegans Hypothetical...    31   0.73 
Z82058-1|CAB04862.2|  352|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p4...    28   9.0  

>AL031627-11|CAA20962.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5C.21 protein.
          Length = 355

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 384 MKLLLYSIYSITLRTLKRSTRLPVLRVCISIKVNSCMPFYIAV 512
           M  L+Y IY +  R++ R TR       ISI   + +PF++A+
Sbjct: 230 MGCLVYYIYIVPSRSVSRETREKQKTFLISILFQTSVPFFVAI 272


>Z82058-1|CAB04862.2|  352|Caenorhabditis elegans Hypothetical
           protein T27C5.1 protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 384 MKLLLYSIYSITLRTLKRSTRLPVLRVCISIKVNSCMPFYIAV 512
           M  L+Y IY +  R++ R TR       ISI + + +PF++ +
Sbjct: 229 MGCLVYYIYIVPSRSVSRETREMQKTFLISILLQTSVPFFVVI 271


>AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p450
           family protein 34A6 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 193 SFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEF 312
           +F   +S ++TDDE +K  K+++ E  M+N   +K +  F
Sbjct: 397 AFATQLSAMHTDDETFKNHKEFNPERFMENNNLEKKLIPF 436


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,326,475
Number of Sequences: 27780
Number of extensions: 292095
Number of successful extensions: 702
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)