Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_G12
(1260 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0066 - 536281-537196,537397-537452 32 1.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.9
12_02_1174 - 26696869-26698191 31 2.5
11_06_0610 - 25449085-25453284 31 2.5
04_04_1125 + 31085106-31085714 31 2.5
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 31 2.5
11_01_0385 + 2915532-2916482 30 3.3
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 30 3.3
03_01_0515 - 3864796-3865425 30 4.4
07_01_0662 + 4972953-4973645,4973758-4974046,4974790-4974803,497... 29 7.7
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 7.7
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 29 7.7
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.7
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 7.7
01_01_0082 + 625198-625719 29 7.7
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2
Query: 200 NPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPP 84
+P P P +A RP S PP + PP P PP
Sbjct: 194 DPAPPTPPTIARPPRPLPPASPPPPSIATPPPSPASPPP 232
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = -2
Query: 224 FXXXSPPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPP 84
F PP NP P + PP + PPPP PP
Sbjct: 18 FPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPP 64
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPP 84
PP P P + RP PP PPPP PP
Sbjct: 123 PPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPP 164
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -3
Query: 196 PXPXXXXSSXRIXVRXXXXVANPPXXXTXPPHXPPXPPVXTXRXPSXEP 50
P P + R+ P + PP PP PP R PS +P
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKP 172
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/77 (25%), Positives = 21/77 (27%)
Frame = -2
Query: 314 PVXXSXPPPHXXXXXXX*PXERXXXXXXNTFXXXSPPKNPXPXXXPXLAXHXRPXXXXSG 135
PV PPP P R PP P P P +P
Sbjct: 121 PVPPPPPPPRTRTRVE--PPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPK 178
Query: 134 XPPXXSHXPPPPXXXPP 84
P S PP P PP
Sbjct: 179 PQPPPSLQPPSPPPPPP 195
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 210 PPXKPXXPXXSXPRXASXSXXXXXWXTPLXLXPPPPTXXXPPPSXPXXYLP 58
PP KP P + S +P+ PPP PPPS LP
Sbjct: 992 PPEKPLPPHTPTINSSPPSEEEYMPPSPVKSSPPPAEKSQPPPSPVESVLP 1042
>04_04_1125 + 31085106-31085714
Length = 202
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 210 PPXKPXXPXXSXPRXASXSXXXXXWXTPLXL-XPPPPTXXXPPPSXP 73
PP P P P A+ + W P PP PT P P+ P
Sbjct: 39 PPPPPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATP 85
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPR 81
PP +P P P H R S P PPP PP+
Sbjct: 31 PPSDPPPPPPPHHHHHHRRRHRHSKKPKPQPQPQPPPPPLPPQ 73
>11_01_0385 + 2915532-2916482
Length = 316
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPP 84
PP P P P +P PP SH PP P P
Sbjct: 223 PPLPPFPSHPPPTPAWPQPGNKWPPLPPFPSHPPPTPAWPHP 264
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -1
Query: 210 PPXKPXXPXXSXPRXASXSXXXXXWXTPLXLXPPPPTXXXPPP 82
PP P P P + P PPPPT PPP
Sbjct: 365 PPPPPPPPPPPPPPAVTQQQDVKTSCGPAVPPPPPPTPPPPPP 407
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = -2
Query: 206 PKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPP 84
P P P P + P PP + PPPP PP
Sbjct: 68 PLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108
>07_01_0662 +
4972953-4973645,4973758-4974046,4974790-4974803,
4974848-4974856
Length = 334
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -2
Query: 212 SPPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPP 99
+P + P P P LA P + P + PPPP
Sbjct: 170 TPSRGPSPVPTPALAPASPPRHRPASPPSYLARPPPPP 207
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +2
Query: 50 RFXGRXSXGXDG--GGXXXVGGGGXXXRGVXHXXXXXDXDAXRGXXXXGXXGFXGG 211
R GR G DG GG GGGG RG RG G G+ GG
Sbjct: 16 RGGGRGGGGGDGRGGGYGGAGGGGVGGRG---GRGPPGGGGGRGYEPGGGRGYGGG 68
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -2
Query: 212 SPPKNPXPXXXPXL----AXHXRPXXXXSGXPPXXSHXPPPP 99
SPP NP P P L A P + PP S P PP
Sbjct: 67 SPPTNPSPPPPPPLDADAAAEAAPSPALTSPPPNPSSSPLPP 108
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -1
Query: 210 PPXKPXXPXXSXPRXASXSXXXXXWXTPLXLXPPPPTXXXPPPSXP 73
PP P P + P P PPPP PPP P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.1 bits (62), Expect = 7.7
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 212 SPPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPP 84
S P++P P P A P PP + PPPP PP
Sbjct: 413 SRPQSPPPPL-PSDAFEQPPPPPEHPPPPESTSPPPPPTSDPP 454
>01_01_0082 + 625198-625719
Length = 173
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 132 TPLXLXPPPPTXXXPPPSXPXXYLP 58
TP+ PPPP PP P Y P
Sbjct: 61 TPVYYPPPPPVYYPPPSPPPVAYPP 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,821,864
Number of Sequences: 37544
Number of extensions: 227933
Number of successful extensions: 3763
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2887
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3899283420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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