Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_G12
(1260 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 33 2.9
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 33 2.9
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 33 2.9
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 33 2.9
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 33 2.9
Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for ... 31 6.7
X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein. 31 6.7
X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein. 31 6.7
M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein. 31 6.7
CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein. 31 6.7
AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands. ... 31 6.7
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 31 8.8
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 31 8.8
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 31 8.8
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 32.7 bits (71), Expect = 2.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P P G PP PPPP PPR P TL
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPP---GPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 337
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 32.7 bits (71), Expect = 2.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P P G PP PPPP PPR P TL
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPP---GPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 337
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 32.7 bits (71), Expect = 2.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P P G PP PPPP PPR P TL
Sbjct: 214 PPLGPLPPGPPPPVPGYGPPP---GPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 264
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 32.7 bits (71), Expect = 2.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P P G PP PPPP PPR P TL
Sbjct: 324 PPLGPLPPGPPPPVPGYGPPP---GPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 374
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 32.7 bits (71), Expect = 2.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P P G PP PPPP PPR P TL
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPP---GPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 337
>Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for
acrosin (EC 3.4.21.10). ).
Length = 421
Score = 31.5 bits (68), Expect = 6.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P A P PP S PPPP PP P L
Sbjct: 330 PPPRPLPPRPPA-AQPRPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGL 382
>X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein.
Length = 421
Score = 31.5 bits (68), Expect = 6.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P A P PP S PPPP PP P L
Sbjct: 330 PPPRPLPPRPPA-AQPPPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGL 382
>X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein.
Length = 421
Score = 31.5 bits (68), Expect = 6.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P A P PP S PPPP PP P L
Sbjct: 330 PPPRPLPPRPPA-AQPPPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGL 382
>M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein.
Length = 184
Score = 31.5 bits (68), Expect = 6.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P A P PP S PPPP PP P L
Sbjct: 93 PPPRPLPPRPPA-AQPPPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGL 145
>CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein.
Length = 421
Score = 31.5 bits (68), Expect = 6.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P A P PP S PPPP PP P L
Sbjct: 330 PPPRPLPPRPPA-AQPRPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGL 382
>AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands.
).).
Length = 232
Score = 31.5 bits (68), Expect = 6.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 209 PPKNPXPXXXPXLAXHXRPXXXXSGXPPXXSHXPPPPXXXPPRXXXXXTFPXTL 48
PP P P P A P PP S PPPP PP P L
Sbjct: 141 PPPRPLPPRPPA-AQPRPPPSPPPPPPPPPSPLPPPPPPPPPTPSSTTKLPQGL 193
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 31.1 bits (67), Expect = 8.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 210 PPXKPXXPXXSXPRXASXSXXXXXWXTPLXLXPPPPTXXXPPPSXP 73
PP P P P TPL PP P PPP P
Sbjct: 1962 PPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPP 2007
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 31.1 bits (67), Expect = 8.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 210 PPXKPXXPXXSXPRXASXSXXXXXWXTPLXLXPPPPTXXXPPPSXP 73
PP P P P P PPPP PPP P
Sbjct: 444 PPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPP 489
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 31.1 bits (67), Expect = 8.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 210 PPXKPXXPXXSXPRXASXSXXXXXWXTPLXLXPPPPTXXXPPPSXP 73
PP P P P P PPPP PPP P
Sbjct: 547 PPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPP 592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.136 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,210,460
Number of Sequences: 237096
Number of extensions: 989319
Number of successful extensions: 10555
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8140
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18000117210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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