Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_G09
(962 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0543 - 25404630-25405408,25405461-25405605 30 3.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.2
12_02_1174 - 26696869-26698191 29 5.5
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 29 5.5
05_05_0266 - 23694466-23696787,23696885-23697187 29 5.5
01_06_1133 + 34781799-34782071,34782168-34783166,34783252-347836... 29 5.5
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 7.3
06_01_0486 - 3455030-3455770 29 7.3
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 9.6
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 9.6
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 9.6
03_01_0515 - 3864796-3865425 28 9.6
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 719 PLXXPSKRATSXNXSPXXPPXXPXXNPXPIRPSXXP*GPXXXPXXPP 859
P PS S SP PP P P RP P P PP
Sbjct: 110 PKKTPSPLTPSPTPSPVTPPPQQPPQPEPRRPPAAPLPGVRTPPSPP 156
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = +2
Query: 704 IPXXAPLXXPSKRATSXNXSPXXPPXXPXXNPXPIRPSXXP*GPXXXPXXPP 859
+P +P P + +P PP P P P P GP P PP
Sbjct: 1149 LPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPP 1200
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +2
Query: 707 PXXAPLXXPSKRATSXNXSPXXPPXXPXXNPXPIRPSXXP*GPXXXP 847
P P PS + P PP P +P P P+ P P P
Sbjct: 191 PPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTP 237
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 761 SPXXPPXXPXXNPXPIRPSXXP*GPXXXPXXPP 859
+P PP P P P P P P P PP
Sbjct: 52 APTAPPPKPSPTPPPASPPPAPTPPQTRPPSPP 84
>05_05_0266 - 23694466-23696787,23696885-23697187
Length = 874
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 189 FVLFIAAAVSADDEPVLARLLVSKQVLN 272
F+LF+ A+S PVLAR+L ++LN
Sbjct: 196 FLLFLGVALSVTAFPVLARILAEVKLLN 223
>01_06_1133 +
34781799-34782071,34782168-34783166,34783252-34783663,
34783727-34784670
Length = 875
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 189 FVLFIAAAVSADDEPVLARLLVSKQVLNXYL 281
F+LF+ A+S PVLAR+L ++LN L
Sbjct: 186 FLLFLGVALSVTAFPVLARILAEIKLLNTEL 216
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 760 LPXXPTTXPXX*PLPNPAXXXPLGXXPPXXPPP 858
LP P P P P P P PP PPP
Sbjct: 424 LPPPPPLPPPPPPPPPPPPPLPPNMPPPLPPPP 456
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 764 PXXPPXXPXXNPXPIRPSXXP*GPXXXPXXPP 859
P PP P P P PS P P P PP
Sbjct: 114 PYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPP 145
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 719 PLXXPSKRATSXNXSPXXPPXXPXXNPXPIRPSXXP*GPXXXPXXP 856
P PS A + + P PP P P P P P GP P P
Sbjct: 599 PPPAPSATANTASALPPPPPRPP-GAPPPPPPPGKPGGPPPPPPRP 643
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 772 PTTXPXX*PLPNPAXXXPLGXXPPXXPPP 858
PT+ P P P P+ PL PP PPP
Sbjct: 56 PTSPPPASP-PLPSATPPLAASPPPPPPP 83
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +2
Query: 707 PXXAPLXXPSKRATSXNXSPXXPPXXPXXNPXPIRPSXXP*GPXXXPXXPP 859
P + PS R + +P PP P P P P P P PP
Sbjct: 330 PDTKQVTSPSPRPVQPSNAPPPPPPPPPPPPPPPPPKLNT-APKPPPPPPP 379
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Frame = +2
Query: 707 PXXAPLXXPSKRATSXNXSPXXPPXXPX-----XNPXPIRPSXXP*GPXXXPXXPP 859
P PL P S SP PP P +P P PS P P PP
Sbjct: 64 PAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,315,611
Number of Sequences: 37544
Number of extensions: 348333
Number of successful extensions: 1149
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2788108120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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