Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_G08
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0115 + 20288220-20288303,20289223-20289706,20290160-202903...    29   3.8  
05_05_0226 + 23442971-23443857,23444209-23446324                       29   5.0  
02_04_0610 + 24335153-24337724,24337835-24338256                       29   5.0  
11_02_0085 - 8162346-8162942,8165568-8166100,8166180-8166906           29   6.6  
07_03_0265 + 15976331-15976645,15977575-15977784,15977869-159779...    29   6.6  
02_05_0519 - 29708600-29709079                                         28   8.7  

>11_06_0115 + 20288220-20288303,20289223-20289706,20290160-20290393,
            20291811-20292770,20292931-20293404,20293406-20294664
          Length = 1164

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +1

Query: 226  TAVSLILLLEKQSSGSI---IEDTVNNLIRDGNRNVLEFAYKLWIGEGKEIVKHYFPGSV 396
            T ++++LL   + SGS    +E +    + D +RN        WIG+ KE+V      +V
Sbjct: 827  TGMAIVLLQNNRFSGSFPVFLERSTKLQLVDLSRNNFSGKLPTWIGDKKELVLLLLSHNV 886

Query: 397  *TGVI 411
             +G+I
Sbjct: 887  FSGII 891


>05_05_0226 + 23442971-23443857,23444209-23446324
          Length = 1000

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +1

Query: 121 LAASAGLIDLDINILSAPTRAETRLVDAITTADYNTAVSLILLLEKQSSGSIIEDTVNNL 300
           LA  A  + LD+ +++A    + R +   TTAD  TAV+ +   E       +E+ V+  
Sbjct: 31  LAQEAQSLQLDLRMIAAVMDDQLRAMGRATTADARTAVARLHAEEMLDLAHDVEECVDRF 90

Query: 301 I 303
           +
Sbjct: 91  L 91


>02_04_0610 + 24335153-24337724,24337835-24338256
          Length = 997

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = +1

Query: 142 IDLDINILSAPTRAETRLVDAITTADYNTAVSLILLLEKQSSGSIIEDTVNNL 300
           +DL++N+L A      + +DA+T     TA+ ++ L E Q  G +I +++ +L
Sbjct: 313 LDLELNMLEAKDTEGWKFLDALTNC---TALEVLALAENQLQG-VIPNSIGSL 361


>11_02_0085 - 8162346-8162942,8165568-8166100,8166180-8166906
          Length = 618

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -2

Query: 206 IASTSLVSALVGADRMLMSKSIRPALAASTQVEKNTKNFILIP*AADTRGMFDQILXIPY 27
           +   +L  A+ G    L  + I    A S  V KN ++ + I    ++  +FD++L IPY
Sbjct: 162 VGCNALHHAIRGGHDDLALELIAAEPALSRAVNKNNESPMFIAAMRNSADIFDRLLAIPY 221

Query: 26  S 24
           S
Sbjct: 222 S 222


>07_03_0265 +
           15976331-15976645,15977575-15977784,15977869-15977916,
           15978307-15978675,15978736-15978747,15978763-15978870,
           15979156-15979493,15980313-15980430,15983247-15984107,
           15984457-15984750
          Length = 890

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 219 IGSGDSIDEPRFRSGRSGQNVNVQVNKTGAGRQHA 115
           +G GD  DE R R+ +S +  N+ V +  AG +HA
Sbjct: 272 LGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHA 306


>02_05_0519 - 29708600-29709079
          Length = 159

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 660 MGDDPX*PAQTPVVPEAR*PXQPRSXSYIYXPP 758
           +G  P  P   PVVP+AR P      S++  PP
Sbjct: 72  VGLPPRPPTSAPVVPQARMPTPTVQNSFVPLPP 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,179,375
Number of Sequences: 37544
Number of extensions: 412518
Number of successful extensions: 1020
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)