Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_G05
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 255 3e-68
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 255 3e-68
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 255 3e-68
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 253 1e-67
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 229 1e-60
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 229 1e-60
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 228 3e-60
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 228 3e-60
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 226 2e-59
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 225 2e-59
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 223 1e-58
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 223 1e-58
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 210 1e-54
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 208 3e-54
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 188 6e-48
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 165 5e-41
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 123 2e-28
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 122 3e-28
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 122 4e-28
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 120 2e-27
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 120 2e-27
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 104 7e-23
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 104 7e-23
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 64 9e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 64 9e-11
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.61
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.3
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.3
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.3
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 255 bits (624), Expect = 3e-68
Identities = 111/132 (84%), Positives = 123/132 (93%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L L
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 505 RIXKLADXCTGL 540
RI +LAD CTGL
Sbjct: 121 RIRRLADNCTGL 132
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/56 (57%), Positives = 35/56 (62%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
FL+FH LLMERLSVDY +K+KLEF IYP AVV PYNSILT
Sbjct: 135 FLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILT 190
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 255 bits (624), Expect = 3e-68
Identities = 111/132 (84%), Positives = 123/132 (93%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L L
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 505 RIXKLADXCTGL 540
RI +LAD CTGL
Sbjct: 121 RIRRLADNCTGL 132
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/56 (57%), Positives = 35/56 (62%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
FL+FH LLMERLSVDY +K+KLEF IYP AVV PYNSILT
Sbjct: 135 FLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILT 190
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 255 bits (624), Expect = 3e-68
Identities = 111/132 (84%), Positives = 123/132 (93%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L L
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 505 RIXKLADXCTGL 540
RI +LAD CTGL
Sbjct: 121 RIRRLADNCTGL 132
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/56 (57%), Positives = 35/56 (62%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
FL+FH LLMERLSVDY +K+KLEF IYP AVV PYNSILT
Sbjct: 135 FLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILT 190
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 253 bits (619), Expect = 1e-67
Identities = 110/131 (83%), Positives = 122/131 (93%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLXR 507
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L L R
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 508 IXKLADXCTGL 540
I +LAD CTGL
Sbjct: 121 IRRLADNCTGL 131
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/56 (57%), Positives = 35/56 (62%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
FL+FH LLMERLSVDY +K+KLEF IYP AVV PYNSILT
Sbjct: 134 FLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILT 189
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 229 bits (561), Expect = 1e-60
Identities = 101/132 (76%), Positives = 118/132 (89%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VL
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 505 RIXKLADXCTGL 540
RI +LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/56 (57%), Positives = 34/56 (60%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
F +FH LLMERLSVDY +KSKLEF IYP AVV PYNSILT
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 229 bits (561), Expect = 1e-60
Identities = 101/132 (76%), Positives = 118/132 (89%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VL
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 505 RIXKLADXCTGL 540
RI +LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/56 (57%), Positives = 34/56 (60%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
F +FH LLMERLSVDY +KSKLEF IYP AVV PYNSILT
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 228 bits (558), Expect = 3e-60
Identities = 100/132 (75%), Positives = 118/132 (89%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VL
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 505 RIXKLADXCTGL 540
RI +LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/56 (57%), Positives = 34/56 (60%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
F +FH LLMERLSVDY +KSKLEF IYP AVV PYNSILT
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 228 bits (558), Expect = 3e-60
Identities = 100/132 (75%), Positives = 118/132 (89%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VL
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 505 RIXKLADXCTGL 540
RI +LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
Score = 61.3 bits (142), Expect = 9e-10
Identities = 32/56 (57%), Positives = 34/56 (60%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
F +FH LLMERLSVDY +KSKLEF IYP AVV PYNSILT
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILT 188
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 226 bits (552), Expect = 2e-59
Identities = 97/132 (73%), Positives = 114/132 (86%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++ +V+
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 505 RIXKLADXCTGL 540
R+ +L + C L
Sbjct: 121 RVRRLTERCQSL 132
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
FLIFH L+MERLS+DY +K+KLEF IYP ++V PYNS+LT
Sbjct: 135 FLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLT 190
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 225 bits (551), Expect = 2e-59
Identities = 97/133 (72%), Positives = 115/133 (86%)
Frame = +1
Query: 142 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 321
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 322 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVL 501
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+ +V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 502 XRIXKLADXCTGL 540
R+ +L + C GL
Sbjct: 125 DRVRRLVENCRGL 137
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
FL+FH LLMERLSVDY +KSKLEF IYP ++V PYNSILT
Sbjct: 140 FLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILT 195
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 223 bits (546), Expect = 1e-58
Identities = 98/132 (74%), Positives = 116/132 (87%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ L
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 505 RIXKLADXCTGL 540
RI +LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/56 (57%), Positives = 34/56 (60%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
F +FH LLMERLSVDY +KSKLEF IYP AVV PYNSILT
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 223 bits (546), Expect = 1e-58
Identities = 98/132 (74%), Positives = 116/132 (87%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ L
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 505 RIXKLADXCTGL 540
RI +LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/56 (57%), Positives = 34/56 (60%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
F +FH LLMERLSVDY +KSKLEF IYP AVV PYNSILT
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 210 bits (513), Expect = 1e-54
Identities = 94/132 (71%), Positives = 108/132 (81%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+ L
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 505 RIXKLADXCTGL 540
RI +LA+ C GL
Sbjct: 118 RIRRLANNCEGL 129
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/56 (50%), Positives = 33/56 (58%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
F +FH +LMERLS +Y +KSKLEF IYP +VV PYNSILT
Sbjct: 132 FFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILT 187
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 208 bits (509), Expect = 3e-54
Identities = 92/131 (70%), Positives = 108/131 (82%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLXR 507
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++ +V+ R
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 508 IXKLADXCTGL 540
+ +LA+ C GL
Sbjct: 128 VKRLAENCNGL 138
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/58 (50%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSIL-TH 716
F+IFH LLMERLS +Y +K KLEF IYP ++V PYNSIL TH
Sbjct: 141 FVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTH 198
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 188 bits (457), Expect = 6e-48
Identities = 81/131 (61%), Positives = 100/131 (76%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLXR 507
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++ +VL R
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 508 IXKLADXCTGL 540
I K + C GL
Sbjct: 125 IRKQTENCEGL 135
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILT 713
FL+FH LLMERLSV++ +KSKLEF +YP +VV PYNSILT
Sbjct: 138 FLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILT 193
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 165 bits (400), Expect = 5e-41
Identities = 72/110 (65%), Positives = 88/110 (80%)
Frame = +1
Query: 211 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 390
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 391 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLXRIXKLADXCTGL 540
YR LFHPEQL++GKEDAAN YARG YTIG+E++ +V+ R+ +LA+ C GL
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGL 110
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/58 (50%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSIL-TH 716
F+IFH LLMERLS +Y +K KLEF IYP ++V PYNSIL TH
Sbjct: 113 FVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTH 170
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 123 bits (296), Expect = 2e-28
Identities = 59/129 (45%), Positives = 79/129 (61%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIXKLADXC 531
+ K A+ C
Sbjct: 119 VVRKEAEGC 127
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 122 bits (294), Expect = 3e-28
Identities = 59/129 (45%), Positives = 80/129 (62%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIXKLADXC 531
I K A+ C
Sbjct: 119 VIRKEAEGC 127
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 122 bits (293), Expect = 4e-28
Identities = 59/129 (45%), Positives = 80/129 (62%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIXKLADXC 531
I K A+ C
Sbjct: 119 VIRKEAEGC 127
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 120 bits (288), Expect = 2e-27
Identities = 57/127 (44%), Positives = 79/127 (62%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIXKLAD 525
+ K A+
Sbjct: 119 VVRKEAE 125
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 120 bits (288), Expect = 2e-27
Identities = 57/127 (44%), Positives = 79/127 (62%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIXKLAD 525
+ K A+
Sbjct: 119 VVRKEAE 125
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 116 bits (280), Expect = 2e-26
Identities = 56/129 (43%), Positives = 75/129 (58%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIXKLADXC 531
+ K A+ C
Sbjct: 119 VVRKEAESC 127
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 104 bits (250), Expect = 7e-23
Identities = 54/132 (40%), Positives = 76/132 (57%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIV VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 505 RIXKLADXCTGL 540
I + A+ L
Sbjct: 119 VIRREAEAADSL 130
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILTHPH 722
F + H LL+ +L +Y K+ I P VV PYN+IL+ PH
Sbjct: 133 FQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPH 191
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 104 bits (250), Expect = 7e-23
Identities = 54/132 (40%), Positives = 76/132 (57%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLX 504
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIV VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 505 RIXKLADXCTGL 540
I + A+ L
Sbjct: 119 VIRREAEAADSL 130
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 546 FLIFHXXXXXXXXXXXXLLMERLSVDYRQKSKLEFXIYPRLXFPLAVVXPYNSILTHPH 722
F + H LL+ +L +Y K+ I P VV PYN+IL+ PH
Sbjct: 133 FQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPH 191
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 64.5 bits (150), Expect = 9e-11
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Frame = +1
Query: 157 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 336
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 337 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVXLVLXR 507
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ ++
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 508 IXKLADXCTGL 540
I + A+ L
Sbjct: 124 IIREAENTNNL 134
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 64.5 bits (150), Expect = 9e-11
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Frame = +1
Query: 157 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 336
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 337 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVXLVLXR 507
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ ++
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 508 IXKLADXCTGL 540
I + A+ L
Sbjct: 124 IIREAENTNNL 134
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 173 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 328
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 367 VDE 375
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 367 VDE 375
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 367 VDE 375
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 435 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 340
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,518,151
Number of Sequences: 27780
Number of extensions: 367104
Number of successful extensions: 756
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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