Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_G04
         (866 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    32   1.2  
AE014134-1255|AAF52498.2|  622|Drosophila melanogaster CG13786-P...    29   6.3  
AY089322-1|AAL90060.1|  604|Drosophila melanogaster AT13327p pro...    29   8.3  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 370  QTLLPWFSLDRCYPRATSRSSTRETILPSNSVLR-QTQITTESHTAMPTTRAARTSAGKL 546
            ++ LP  S DR  P   S S    TILPS+   R  +  TTES   +PTTR    S  + 
Sbjct: 6626 ESTLPSRSTDRTTP---SESPETPTILPSDFTTRPHSDQTTESTRDVPTTRPFEASTPRP 6682

Query: 547  IPL 555
            + L
Sbjct: 6683 VTL 6685



 Score = 31.5 bits (68), Expect = 1.6
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 370  QTLLPWFSLDRCYPRATSRSSTRETILPSNSVLR-QTQITTESHTAMPTTRAARTS 534
            ++ LP  S DR  P   S S    T LPS+   R  ++ TTES   +PTTR   TS
Sbjct: 6349 ESTLPSRSTDRTTP---SESPETPTTLPSDFTTRPHSEKTTESTRDVPTTRPFETS 6401



 Score = 31.1 bits (67), Expect = 2.1
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +1

Query: 361  GNRQTLLPWFSLDRCYPRATSRSSTRETILPSNSVLR-QTQITTESHTAMPTTRAARTSA 537
            G  ++ LP  S DR  P   S S    T LPS+   R  +  TTES   +PTTR    S 
Sbjct: 7643 GVEESTLPSRSTDRTTP---SESPETPTTLPSDFTTRPHSDQTTESTRDVPTTRPFEAST 7699

Query: 538  GKLIPL 555
             + + L
Sbjct: 7700 PRPVTL 7705


>AE014134-1255|AAF52498.2|  622|Drosophila melanogaster CG13786-PA
           protein.
          Length = 622

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +1

Query: 400 RCYP-RATSRSSTRETIL--PSNSVLRQTQITTESHTAMPTTRAARTSAGKLIPLWENN 567
           +C P R  S+S+ R  +L  P+N  +  T  T  S T   TT +      KL+P  + N
Sbjct: 148 KCDPKRKASKSAARNELLALPNNGTINSTTSTPLSSTTETTTDSKIIKIRKLVPKTKTN 206


>AY089322-1|AAL90060.1|  604|Drosophila melanogaster AT13327p
           protein.
          Length = 604

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 168 LRPERKRGSSMLSPLPITTRLFL*FCCSRNNRVEASSRIPSTI 296
           +RP   R ++ L+PLP+T       CCS N         PS+I
Sbjct: 434 IRPMAPRLANALTPLPLTPPPKKYICCSANKAANPRRSEPSSI 476


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,333,106
Number of Sequences: 53049
Number of extensions: 730313
Number of successful extensions: 2600
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2599
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)