Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_G02
         (819 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    35   2.1  
UniRef50_Q6C9I8 Cluster: Similar to sp|P41832 Saccharomyces cere...    35   2.1  
UniRef50_A7H704 Cluster: Heat shock protein DnaJ domain protein;...    35   2.8  
UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2; ...    35   2.8  
UniRef50_Q84VV2 Cluster: At4g03120; n=7; Viridiplantae|Rep: At4g...    35   2.8  
UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    33   6.6  
UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyosteli...    33   6.6  

>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC03138 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 156

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 16/32 (50%), Positives = 16/32 (50%)
 Frame = -3

Query: 253 FFXGGXPPPXXXFFFFXGXXXPPXXXGGPXPP 158
           FF G  PPP    FFF     PP   GGP PP
Sbjct: 29  FFYGAPPPPPP--FFFNKKKRPPPPPGGPPPP 58


>UniRef50_Q6C9I8 Cluster: Similar to sp|P41832 Saccharomyces
            cerevisiae YNL271c BNI1 regulator of budding; n=1;
            Yarrowia lipolytica|Rep: Similar to sp|P41832
            Saccharomyces cerevisiae YNL271c BNI1 regulator of
            budding - Yarrowia lipolytica (Candida lipolytica)
          Length = 1851

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 18/43 (41%), Positives = 18/43 (41%)
 Frame = -3

Query: 250  FXGGXPPPXXXFFFFXGXXXPPXXXGGPXPPGXPXXXXXXFXG 122
            F GG PPP      F G   PP   GGP PP  P      F G
Sbjct: 1078 FTGGPPPPG-----FTGGPPPPGFTGGPPPPPPPPPLPPGFTG 1115


>UniRef50_A7H704 Cluster: Heat shock protein DnaJ domain protein;
           n=1; Anaeromyxobacter sp. Fw109-5|Rep: Heat shock
           protein DnaJ domain protein - Anaeromyxobacter sp.
           Fw109-5
          Length = 627

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = +1

Query: 568 GXXPXPAXAAXPPPHXTRPXXXRRXPPXPPRA 663
           G  P P  AA PPP        R  PP PPRA
Sbjct: 30  GYRPPPVRAATPPPRVAPEASARAAPPVPPRA 61


>UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2;
           Mycobacterium|Rep: Putative uncharacterized protein -
           Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
          Length = 377

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 23/80 (28%), Positives = 26/80 (32%)
 Frame = +3

Query: 114 PXXPKXXXXXXXGXPGGXGPPXXXGGXXXPXKKKXXXXGGGXPPXKKXXKXXPXXGXXGX 293
           P  P          P G  PP   GG   P +      GG  PP        P  G    
Sbjct: 19  PPPPPDGGYPPPPPPDGGYPPAQPGGFGPPPQ------GGYPPPPPPGGYPPPPQGGFPP 72

Query: 294 PXPFFFLXPPXPXXKTNPPP 353
           P P  +  PP P   + PPP
Sbjct: 73  PPPGGYPPPPPPQGGSYPPP 92


>UniRef50_Q84VV2 Cluster: At4g03120; n=7; Viridiplantae|Rep:
           At4g03120 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 207

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
 Frame = +3

Query: 156 PGGXGPPXXXGGXXXPXKKKXXXXGGGXPPXKKXXKXXPXXGXXGXPXPFFFLXPPXPXX 335
           PG   PP    G   P         GG PP        P  G  G P P +   PP P  
Sbjct: 122 PGAPLPPPPQNGILRPPGMAPIPGQGGGPPGMA-----PIPGQGGGPPPNYNGLPPPPPY 176

Query: 336 KTNP--PP 353
            TNP  PP
Sbjct: 177 HTNPAAPP 184


>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 24/75 (32%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
 Frame = -3

Query: 328 GXGGXKKKKGXGXPXXPXKGXXFXXFFXGGXPPPXXXFFFF---XGXXXPPXXXGGPXPP 158
           G G    KK  G P  P        FF    PPP     FF    G    P   G P PP
Sbjct: 72  GGGVFFYKKKRGGPPPPPTTQKKKNFFFSPPPPPSFWGXFFGGGGGFVXXPPRGGAPPPP 131

Query: 157 GXPXXXXXXFXGXXG 113
           G        + G  G
Sbjct: 132 GGAPPPLFFWGGKRG 146



 Score = 33.5 bits (73), Expect = 6.6
 Identities = 19/58 (32%), Positives = 21/58 (36%)
 Frame = +3

Query: 150 GXPGGXGPPXXXGGXXXPXKKKXXXXGGGXPPXKKXXKXXPXXGXXGXPXPFFFLXPP 323
           G P G  P    GG   P KK      G  PP +K  +          P  FFF  PP
Sbjct: 200 GGPPGGAP---RGGLPHPKKKGGGAAAGAPPPERKNRRCFSQQNFFSPPPFFFFRRPP 254


>UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyostelium
           discoideum|Rep: Actin-binding protein - Dictyostelium
           discoideum AX4
          Length = 1220

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = -1

Query: 243 GXXPPPXXXFFFXGGPXXPPXXGGGXXPPXXP 148
           G  PPP       GGP  PP  GG   PP  P
Sbjct: 606 GGPPPPPPPPMMGGGPPPPPPMGGKGGPPPPP 637


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,516,002
Number of Sequences: 1657284
Number of extensions: 5591745
Number of successful extensions: 30899
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26374
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 71200899835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)